Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g2480 ATGAATCTGAATCTCACACAGGCTTCCCGTCGTGGACACCTGTCTTGTTACGCGTGTAGCCGTGCAGCGGGAGTGCAGAGTCCACGACAGTCTCCTCAATCTCATTGTCTTCTTTGCTCTTCACCCTCTTCCTTGGCCTTCCTGGCTCCGAGCCCTAAACACCAAAGATCTGATTCCCCCCTATCCTCTATCTTCGTGCGCTGTCAGACTCCAGACTCGTCTCCCTGTCCTTCTGGGCACAATCTCTTCACCGTCTCACGTGGTTTGAACTTGGATAAGGAAGTCTTGTATATAATGAGTACTCGAGCGCTCAGGGGTGCTGCTGTCAGAAGTTACCGGCGGAGGAAGACAGCTCTGGACTTGGATCTTAACCGGGATCCACCTGTTGAAAGTCGGGAGCTGGAGGGACCTTCAGCTCAGCTGGAGCCTCAAGCTGGCCTTCAACTGCAGGTTGCACAAGCACAACCTGCAATGATTGATGTTGAGGCCATTGATGATGATGTTGTTGAATCTACTCCCCGGGCTTTTGCTGAGGCTAAAAACAATTCAAGGAGAAATCGCAGCAGGGCTATAGTTGATGTGGATTTAGATCGGACTAGGGTAACTAATAATAATCGCAACAAACGCAGAAGAGGTTCTCCAAGCCAAACAATTATTAACTGTGATCTTTATATAAACTTGGAAGGCAGTAGCGGTTCTATGAAAGAAAATGTTAGGAAGTCTCCTGAACCTCCGAAGGAGCCTGTTTTCAACTGCCCAATCTGTATGGGTCCTTTGGCGGAAGAAATGTCGACAAGGTGTGGTCATATTTTTTGCAAGAGTTGCATTAAGGCTGCGATAAATGCACAGGGTAAATGCCCTACCTGTAGGAAAAAGGTTACCGCGAAAGAGCTCATAAGGGTTTTTCTGCCATCAACTACTTGA 924 0.4805 MNLNLTQASRRGHLSCYACSRAAGVQSPRQSPQSHCLLCSSPSSLAFLAPSPKHQRSDSPLSSIFVRCQTPDSSPCPSGHNLFTVSRGLNLDKEVLYIMSTRALRGAAVRSYRRRKTALDLDLNRDPPVESRELEGPSAQLEPQAGLQLQVAQAQPAMIDVEAIDDDVVESTPRAFAEAKNNSRRNRSRAIVDVDLDRTRVTNNNRNKRRRGSPSQTIINCDLYINLEGSSGSMKENVRKSPEPPKEPVFNCPICMGPLAEEMSTRCGHIFCKSCIKAAINAQGKCPTCRKKVTAKELIRVFLPSTT 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g2480 307 ProSitePatterns Zinc finger RING-type signature. 267 276 IPR017907 -
Prci5g2480 307 SMART ring_2 252 289 IPR001841 -
Prci5g2480 307 ProSiteProfiles Zinc finger RING-type profile. 252 290 IPR001841 -
Prci5g2480 307 Pfam Zinc finger, C3HC4 type (RING finger) 251 289 - -
Prci5g2480 307 PANTHER ELFLESS, ISOFORM B 99 306 - -
Prci5g2480 307 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 226 305 IPR013083 -
Prci5g2480 307 SUPERFAMILY RING/U-box 247 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g2480 Prci-Chr5 41321038 41328520 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g2480 110 306 C3H Transcription Factor Family AT5G48655 52.475 1.22e-50 164