Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g2478 ATGTCACGTCAGACCCCCACCTCCGCCTTTATCAAATCCAAGACCCTTGACAATAAATATATGCTTGGAGATGAGATAGGGAAAGGAGCATACGGTCGAGTTTACAAAGGTTTGGACCTAGAAAATGGGGACTTTGTTGCAATTAAGCAAGTTTCTCTGGAGAATATTGCTCAGGAAGATCTCAACATCATCATGCAAGAGATCGATTTATTAAAGAATTTGAACCATAAAAACATTGTAAAATATCTTGGATCCTTAAAGACAAAGACTCACCTTCACATCATTCTTGAGTACGTGGAGAATGGCTCACTTGCTAATATTATCAAGCCAAATAAATTTGGACCCTTTCCAGAATCATTGGTTGCTGTTTATATTGCTCAGGTATTGGAAGGCTTGGTTTACCTACATGAACAGGGTGTCATCCATCGGGATATCAAGGGTGCAAACATATTGACAACCAAAGAGGGTCTAGTCAAACTTGCTGATTTTGGTGTTGCAACAAAGTTGACTGAGGCTGATGTTAATACTCATTCAGTTGTTGGAACTCCATATTGGATGGCTCCAGAGGTTATAGAAATGTCGGGGGTTTGTGCTGCTTCTGACATTTGGAGTGTCGGCTGTACTGTTATTGAACTCCTTACATGTGTGCCTCCGTATTATGATCTACAGCCTATGCCAGCTCTCTTTCGTATTGTTCAGGATGAACATCCTCCAATTCCTGATAGCCTGTCTCCTGATATCACTGATTTTCTGCGTCAATGCTTTAAGAAGGATGCTAGACAAAGGCCTGATGCTAAGACGCTGTTATCTCACCCATGGATACAAAATTGTAGACGTGCGCTGCAGTCATCTCTTCGACACAGTGGAACATTAAGAAATATAGAGGAAGATGATTCCACAGATGTAGCAGCTTCTGGTGATGATCAGAAGAGTGCTGGTGAAGGCTCATCTGTGGAGAAAGTGAACCCATTGAAAGACTTGTCAATTGAGGTTGTTGGTGGCAGCAAACATCACGAGGATGTAGGTTCAGATTCTGATTTTCTGATTGAGAAAACAGAGAAGCAGGATGATGTGTTTTCAGATCAAGTTCTCACTTTAGCTATTCATGAGAAGTTGTCTCTACAAACTGGATCTAGTAAGCCCTGTTCTAATGGCGAAGTTGCTACCACTGAGATGAGTGCAGATCATGTCATTCCCAATACTAAAGACCGTAATGAAGTCATGATGCATGGAGAAGTTGGATCTCCAGAATCAAGAGGGATAAGTAGAAAGCCTGGGGTAAAAGGTAGCTCTGTCACCAGTGGCAGTATGCCATTCTGTTTTGGACCAAGAGGTCAGGACAATGGTTCCCTAAAGACTATGAAGATGCTTCCCTCTTTGGAAGGGAATGAGCTGAGCAGATTTAGCGATCCTCCTGGAGATGCCTCTTTAGATGATTTATTTCATCCATTAGATAAACACCCTAGAGACTCTGCAGCTGAGGCTTCCACATCTGCATCCACATCACACATGGCGAATGATAATGCATCTATGAACAATGGTGGAAAAAGTGACCTGGCTAAAGAGTTGAGGGAAACTATTGCTCGGAAGCAGTGGGAGAAGGAGATTGAAATTGGGAAGGAAAATGGTGGCGGGAATCTTTTACGCTTGATGATGGGAGTCATAAAAGATGATGTAATCGATATAGATGGTCTGGTTTTTGATGAAAAATTGCCTGGGGAAAACCTTTTCCCTTTGCAGGCTGTTGAGTTCAGCAAATTAGTTGGGTCATTGCGACCAGAGGAATCAGAAGATGTGGTTGTCACTGCATGTCAGAAACTTATCACTATCTTTCACCAACGTCCAGAGCAGAAGATTGTTTTTGTTACCCAGCATGGTTTGCTTCCACTTACAGACTTGCTAGAAGTTCCTAGAACTCGTGTAATATGTTCTGTACTCCAGCTTGTAAATCAAATTATCAAGGATAATACTGATTTTCAAGAAAATGCTTGTCTTGTTGGATTGATTCCCATGGTGATGAGCTTTGCAGGACCTGATCGTCCACGAGAAATTCGCATGGAAGCAGCTTTTTTTTTGCAGCAGCTTTGTCAGTCAAGCTCTTTGACTTTGCAAATGTTTATAGCTTGCCGTGGAATCCCAGTTTTAGTAGGATTTCTGGAGGCTGATTATGCCAAGTACAGGGAAATGGTACATCTGGCTATTGACGGCATGTGGCAAGTCTTTAAGCTTCAGCGATCAACCCCTAGAAATGACTTTTGTCGAATAGCTGCAAAGAATGGAATACTCCTGAGGCTTATAAACACCCTTTATAGCTTAAATGAGGCAACACGACTAGCTTCTATATCTGTTGGGGTTGGATTTCCAGTTGATGGTTTGGCTCAACGTCCACGATCTGGGCCCTTGGATTCGACACATCCTCTTAGCATTCAGAATGATGCACTGCTGTCTTCAGCAGACCAGTTGGATCTCCCTAAACTGAGGCATGGGATACTTGATCATCACTTGGACCCTTCACTTGCCTCAACCTCACAACCTCAAAGATCAGATGGTAATTACTCTGTAGAGGTTGATAGGCTTCAATCTAGCAACGCAGCAGCTGAGTTTACGTCAGAAAAGAGTACAAATGTAGCATCCAAGGAACCTTCAAAGGAGAGGGACAACATGGATCGATGGAAAAATGATTCTTCTCGAGCAGATGTTGAACTTAGACAGCAGCGTATTAGTAATTCTGCTAGCAGGGCATCAACAGATAGGGCTTTGAAATTGACAGATCCTGCATCAAATGGATTATCACTGGCAGGAGCTACACAGCAAGAGCAGGTTAGGCCTCTTCTTAGCTTGTTAGAGAAAGAGCCTCCATCTAGACAAATATCTGGTCAGCTTGAATATGTACGCCAGTTGTCAGGATTAGAAAGGCATGAAAGTGTACTCCCTTTACTACATGCCTCTGAGAAGAAGACAAATGGTGAGCTGGACTATTTGATGGCAGAATTTGCAGATGTTTCCCAACGTGGTAGAGAAAATGGAAATCTTGACAGTGGTGCTAGAGTGTCTTACAAAGCTGCTTCAAAGAAACCAGGGGCTTTAGGGTCTAATGAAGGGGCTGCATCCACATCTGGGATTGTATCTCAGACAGCTTCAGGTGTGCTGTCTGGTTCAGGCGTCTTAAATGCTAGACCAGGCAGTGCAACTTCATCTGGGCTTCTTTCCCACATGGTTTCATCATTGAATGCTGATGTTGCCAGGGAGTACCTGGAAAAAGTAGCAGATCTTCTGCTTGAGTTTGCTCAAGCTGACACGACAGTGAAGTCTTATATGTGTAGCCAAAGCTTGCTCAGTCGTCTTTTCCAGATGTTTAATAGGGTGGAGCCTCCAATTCTGTTAAAGATACTGAAGTGTATTAATCATCTGTCAACTGATCCAAACTGCTTAGAGAATCTGCAACGTGCTGAAGCAATAAAATACTTGATACCAAATCTGCAACTCAAAGAAGGGCCACTTATATCACAGATGCATCATGAGGTCTTGAATGCACTGTTCAATTTATGCAAGATAAACAAGAGGAGACAAGAACAAGCTGCTGAAAATGGGATTATTCCCCATCTGATGCAATTTATAACCTCAAATTCTCCCTTGAAACAATATGCATTGCCTCTACTGTGTGACATGGCCCATGCATCTCGAAATTCAAGGGAGCAGTTAAGGGCCCATGGGGGTTTGGACGTCTATTTGAACCTTCTTGAGGATGAGATTTGGTCAGTGACGGCATTAGATTCTATTGCTGTTTGCTTGGCTCATGATAATGACAATAGGAAGGTTGAACAAGCATTACTGAAAAAGGATGCAGTGCAGAGGCTGGTCAAGTTCTTCCAGACCTGTCCAGAGCAGTATTTTGTGCACATATTGGAGCCATTCTTGAAAATCATCACAAAATCTGTGCGGATTAATACCACATTAGCTGTTAATGGATTAACTCCCTTACTGATTGCAAGGCTTGATCATCGAGATGCTATAGCTCGTCTTAATTTACTCAAACTTATAAAGGCTGTTTATGAGCACCACCCTCAGCCCAAGAAGTTGATTGTGGAGAATGATTTGCCTCAGAAGCTACAGAGCTTGATAGAGGAGAGAAGAGATGGGCAAAGCTCGGGAGGCCAAGTGTTGGTCAAACAGATGGCTACTTCTTTACTTAAAGCTCTACACATAAACACCGTTTTGTAA 4221 0.4267 MSRQTPTSAFIKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGSLKTKTHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYDLQPMPALFRIVQDEHPPIPDSLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRHSGTLRNIEEDDSTDVAASGDDQKSAGEGSSVEKVNPLKDLSIEVVGGSKHHEDVGSDSDFLIEKTEKQDDVFSDQVLTLAIHEKLSLQTGSSKPCSNGEVATTEMSADHVIPNTKDRNEVMMHGEVGSPESRGISRKPGVKGSSVTSGSMPFCFGPRGQDNGSLKTMKMLPSLEGNELSRFSDPPGDASLDDLFHPLDKHPRDSAAEASTSASTSHMANDNASMNNGGKSDLAKELRETIARKQWEKEIEIGKENGGGNLLRLMMGVIKDDVIDIDGLVFDEKLPGENLFPLQAVEFSKLVGSLRPEESEDVVVTACQKLITIFHQRPEQKIVFVTQHGLLPLTDLLEVPRTRVICSVLQLVNQIIKDNTDFQENACLVGLIPMVMSFAGPDRPREIRMEAAFFLQQLCQSSSLTLQMFIACRGIPVLVGFLEADYAKYREMVHLAIDGMWQVFKLQRSTPRNDFCRIAAKNGILLRLINTLYSLNEATRLASISVGVGFPVDGLAQRPRSGPLDSTHPLSIQNDALLSSADQLDLPKLRHGILDHHLDPSLASTSQPQRSDGNYSVEVDRLQSSNAAAEFTSEKSTNVASKEPSKERDNMDRWKNDSSRADVELRQQRISNSASRASTDRALKLTDPASNGLSLAGATQQEQVRPLLSLLEKEPPSRQISGQLEYVRQLSGLERHESVLPLLHASEKKTNGELDYLMAEFADVSQRGRENGNLDSGARVSYKAASKKPGALGSNEGAASTSGIVSQTASGVLSGSGVLNARPGSATSSGLLSHMVSSLNADVAREYLEKVADLLLEFAQADTTVKSYMCSQSLLSRLFQMFNRVEPPILLKILKCINHLSTDPNCLENLQRAEAIKYLIPNLQLKEGPLISQMHHEVLNALFNLCKINKRRQEQAAENGIIPHLMQFITSNSPLKQYALPLLCDMAHASRNSREQLRAHGGLDVYLNLLEDEIWSVTALDSIAVCLAHDNDNRKVEQALLKKDAVQRLVKFFQTCPEQYFVHILEPFLKIITKSVRINTTLAVNGLTPLLIARLDHRDAIARLNLLKLIKAVYEHHPQPKKLIVENDLPQKLQSLIEERRDGQSSGGQVLVKQMATSLLKALHINTVL 1406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g2478 1406 FunFam MAP3K epsilon protein kinase 1 17 306 - -
Prci5g2478 1406 FunFam MAP3K epsilon protein kinase 1 578 792 - -
Prci5g2478 1406 Pfam Protein kinase domain 21 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g2478 1406 FunFam MAP3K epsilon protein kinase 1-like 1055 1401 - -
Prci5g2478 1406 ProSiteProfiles Protein kinase domain profile. 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g2478 1406 SMART serkin_6 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g2478 1406 MobiDBLite consensus disorder prediction 292 322 - -
Prci5g2478 1406 Gene3D - 576 783 IPR011989 -
Prci5g2478 1406 CDD STKc_Cdc7_like 19 274 - -
Prci5g2478 1406 MobiDBLite consensus disorder prediction 412 516 - -
Prci5g2478 1406 SUPERFAMILY ARM repeat 1067 1379 IPR016024 -
Prci5g2478 1406 SMART arm_5 614 654 IPR000225 GO:0005515
Prci5g2478 1406 SMART arm_5 1186 1225 IPR000225 GO:0005515
Prci5g2478 1406 Gene3D - 1057 1404 IPR011989 -
Prci5g2478 1406 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 17 728 - -
Prci5g2478 1406 PRINTS Tyrosine kinase catalytic domain signature 200 222 IPR001245 GO:0004672|GO:0006468
Prci5g2478 1406 PRINTS Tyrosine kinase catalytic domain signature 96 109 IPR001245 GO:0004672|GO:0006468
Prci5g2478 1406 PRINTS Tyrosine kinase catalytic domain signature 134 152 IPR001245 GO:0004672|GO:0006468
Prci5g2478 1406 PRINTS Tyrosine kinase catalytic domain signature 243 265 IPR001245 GO:0004672|GO:0006468
Prci5g2478 1406 MobiDBLite consensus disorder prediction 902 917 - -
Prci5g2478 1406 Gene3D Transferase(Phosphotransferase) domain 1 17 313 - -
Prci5g2478 1406 MobiDBLite consensus disorder prediction 493 515 - -
Prci5g2478 1406 SUPERFAMILY Protein kinase-like (PK-like) 17 275 IPR011009 -
Prci5g2478 1406 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Prci5g2478 1406 MobiDBLite consensus disorder prediction 863 918 - -
Prci5g2478 1406 MobiDBLite consensus disorder prediction 877 901 - -
Prci5g2478 1406 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Prci5g2478 1406 SUPERFAMILY ARM repeat 585 780 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g2478 Prci-Chr5 41274349 41303682 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g2478 1 1406 MAP Kinase Kinase Kinase AT3G13530 72.304 0.0 1995
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE-Pl Prci5g2478 Pkinase 9.4e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g2478 - - pcin:129311394 2700.23