Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g2475 ATGTACTTTAGGAGAATACAATGTCGAGATTGGAGGTGGGGCATTTCGTTTCAGCCATCCAAATATTCTATTAGGCCGAGATGCTATGGTCATGCATGCTTTCAATCCCAGTGCACTAAGACTACCGTGGAAGAATGTGTTTCACATGATAGCATAATAAGGAGATGTCTGTTGGGATCTTTTTTGTCCAGGGTCGCATCATCTAATAATAATTGTATTGATCTGAATAGAAGGCCTAATTTATATTTGAGAAGTACTCAGTTACGCATCTACAGTTCAGAAAGTGATGGAAGGAATGCAAGTGAGGATAAACATGTAAATGCACATGATGGAGCTCACTGTGATAAGGAAAAGAACTGCCAAGATAAGTTTGGCGAAGATGCCAAACTCTGTAATTCTCATGCTCGACTTGGGGAGCAGGATCAAGAGGAGTGGCTCAAGAATGAGAAGATTTCCATTGAAAATAAAAAAAGAGAATCACCCTTTTTGACCAGAAAGGATAAGCTCAAAAACGAGTTCCTGAGAAGGGTTGTTCCTTGGGAGAAAATAAACATTTCATGGGACACATTTCCTTACTATATTCAAGAGAATACCAAAAATCTTCTGGTGGAATGTGCTGCTTCCCATTTGAGACATAATAAGGTTGCTTCTTCTTATGGTGCCCGTCTCTCGTCTTCTAGTGGGAGAATATTGCTCCAGAGCGTTCCTGGTAGTGAGCTCTATCGAGAGAGATTAGTTAGAGCACTTGCACAAGATCTAAAAGTTCCTTTGCTGGTTCTCGATAGCAATATCCTTGCTCCTTATTATATTGATGATGATTTATCATCATCAGAATGTGAGTCTGATGATGATAATGCAGAATCTGGTGAGGAGGCTTCTCTGGAGTCAGAGGATGAAGATGATAATGATGCTAGCAATGAAGAGGAGTGGACTAGCAGCACTGAGGCAAAGTCAGATGCTAGTGATAATGAAGAACATGATGCGATAGCAACTGCTGAAGCAGCCCTAAAGAAGGTGAAAGCAGCTGTTCAGAAACTAGTTCCCTACAACATTGAAGACTTTGAAAAGAGGTCATCTGAAGAGTCAGAAAATTCTGAGTCAACCAAATCTGAGGTTGTGAAGCCTTCTGACCAATCTGGATGCCAATTAAAGAAAGGTGACCGTGTGAAATACATTGGGCCATCTGTTCAAATGAAAGTCAACAATAGGATCATACTGGGGAAGATACTGACATCTGATGGTCCAACTAATGCTTACACTAATATCCATGGAAGATCTCTCTCCAATGGTCAACGAGGAGAGGTATATGAGGTGGAGGGGGATCAAGTTGCTGTCATCATGGACATTAGCGAAGATAATGCAAAGGAGGTTGAGGTGGAGAAATCTAATGAACATACAGAATCTCGACTTTGTTGGATACATGTTAAGGACATTGAGCATGACCCTGATGCTCATGTACAGGATTGCTACATTGTTATGGAGGCTCTATGTGAGGTTTTGGATTCCAAACAACCTCTTGTTGTCTATTTCCCAGACAGTACACAGTGGTTTCATAATTCAGTCCTGAAGTCTAACAGAAAAGAGTTCTTTCATAAGGTTCAAGAAATGTTTGACAAGTTGTCCGGTCCAGTTGTGTTGATTTGTGGACAAAACAAAATTCAATCTGGGTCAAAAGAGAAAAAGCAATTTACAATGATACTTCCAAACTTTGGACGCGTTGGTAAGCTGCCTCTTTCTCTGAAACACTTGACTGAGGGACTTGGAGCAACAAAGAGATTGGATGATAATGAAATCCACAAGCTTTTCACCAATGTTTTGTGCATGCATCCGCCAAAGGAGGAAGATCAACTTGGAACTTTTAAAAAACAACTTGAGGAAGACAGGAAAATTGTGATCCGTAGTAGTTTGAATGAACTACATAAGGTTCTTGAAGAACATGAGCTATCATGCTTGGACCTCTTGCAAGTAAATACTGACAGTGTCATTCTGACAAAGCAAAAAGCTGAAAAGGTGGTGGGCTGGGCAAAAAATAATTACTTGTCATCTTGCCCACTTCCTTATGTTAAAGGAGAACGATTGTGCCTGCCTCGTGAAAGTCTTGAAATTGCAATCTCAAGATTGAAGGATCAAGAAACTATGTCACGGAAGCCCTCTCAGGGTCTGAAGAACCTTGCAAAGGATGAGTACGAGGGCAACTTTATTTCAGCTGTAGTACCTCCTGGTGAAATTGGGGTAAAGTTTGATGACATAGGTGCTCTTGAAGATGTGAAGAAGGCTCTTAATGAACTTGTCATCCTTCCGATGAGAAGGCCTGAGCTTTTCTCTCGTGGAAATTTGTTACGGCCTTGCAAAGGAATATTACTTTTTGGTCCTCCTGGCACTGGGAAAACTCTTCTGGCCAAGGCACTCGCAACGGAAGCAGGTGCAAATTTTATCAGCATAACCGGTTCAACTCTAACATCAAAGTGGTTTGGAGATGCTGAGAAACTTACCAAAGCCCTTTTCTCCTTTGCCAGCAAGCTTTCTCCTGTCATTATATTTGTTGATGAAGTTGATAGTTTGCTTGGTGCACGAGGTGGTGCTTTTGAGCATGAAGCCACTAGAAGAATGAGGAATGAGTTCATGGCAGCTTGGGACGGTTTGAGGACCAAAGAGAGCCAAAGAATCCTCATTCTTGGTGCAACAAACAGGCCTTTCGATCTTGATGATGCTGTTATACGCCGCTTACCAAGAAGGATATATGTGGATTTGCCAGATGCTGAAAATCGGATGAAGATCTTAAGAATATTTCTCGCACAAGAAAATCTTGATCTTGATTTTCGGTTTGAGAAACTTGCCAACTTGACTGAGGGATACTCTGGCAGTGATTTGAAGAACCTTTGCATTGCTGCGGCATATAGACCTGTTCAAGAGCTCCTAGAGAATGAAAAGAAGGCGGGTTATAATGGTCCAACGGCAGCATTAAGGCCTCTAAAATTGGATGATTTTGTTCAGGCAAAATCTAAGGTTGGCCCATCAGTGGCCTATGATGCAGCAAGCATGAATGAGTTGAGGAAGTGGAATGAAATGTACGGAGAAGGTGGAAGTAGGACAAATTCTCCATTTGGATTTGGAAGCTGA 3120 0.4154 MYFRRIQCRDWRWGISFQPSKYSIRPRCYGHACFQSQCTKTTVEECVSHDSIIRRCLLGSFLSRVASSNNNCIDLNRRPNLYLRSTQLRIYSSESDGRNASEDKHVNAHDGAHCDKEKNCQDKFGEDAKLCNSHARLGEQDQEEWLKNEKISIENKKRESPFLTRKDKLKNEFLRRVVPWEKINISWDTFPYYIQENTKNLLVECAASHLRHNKVASSYGARLSSSSGRILLQSVPGSELYRERLVRALAQDLKVPLLVLDSNILAPYYIDDDLSSSECESDDDNAESGEEASLESEDEDDNDASNEEEWTSSTEAKSDASDNEEHDAIATAEAALKKVKAAVQKLVPYNIEDFEKRSSEESENSESTKSEVVKPSDQSGCQLKKGDRVKYIGPSVQMKVNNRIILGKILTSDGPTNAYTNIHGRSLSNGQRGEVYEVEGDQVAVIMDISEDNAKEVEVEKSNEHTESRLCWIHVKDIEHDPDAHVQDCYIVMEALCEVLDSKQPLVVYFPDSTQWFHNSVLKSNRKEFFHKVQEMFDKLSGPVVLICGQNKIQSGSKEKKQFTMILPNFGRVGKLPLSLKHLTEGLGATKRLDDNEIHKLFTNVLCMHPPKEEDQLGTFKKQLEEDRKIVIXRSSLNELHKVLEEHELSCLDLLQVNTDSVILTKQKAEKVVGWAKNNYLSSCPLPYVKGERLCLPRESLEIAISRLKDQETMSRKPSQGLKNLAKDEYEGNFISAVVPPGEIGVKFDDIGALEDVKKALNELVILPMRRPELFSRGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFASKLSPVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRTKESQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDAENRMKILRIFLAQENLDLDFRFEKLANLTEGYSGSDLKNLCIAAAYRPVQELLENEKKAGYNGPTAALRPLKLDDFVQAKSKVGPSVAYDAASMNELRKWNEMYGEGGSRTNSPFGFGS 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g2475 1040 ProSitePatterns AAA-protein family signature. 890 909 IPR003960 GO:0005524|GO:0016887
Prci5g2475 1040 MobiDBLite consensus disorder prediction 275 329 - -
Prci5g2475 1040 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 745 921 - -
Prci5g2475 1040 Gene3D - 919 1004 - -
Prci5g2475 1040 SMART AAA_5 783 920 IPR003593 GO:0016887
Prci5g2475 1040 Pfam AAA+ lid domain 940 975 IPR041569 -
Prci5g2475 1040 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 745 967 IPR027417 -
Prci5g2475 1040 Gene3D - 746 1022 IPR027417 -
Prci5g2475 1040 MobiDBLite consensus disorder prediction 275 308 - -
Prci5g2475 1040 MobiDBLite consensus disorder prediction 310 329 - -
Prci5g2475 1040 MobiDBLite consensus disorder prediction 357 385 - -
Prci5g2475 1040 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 168 1032 - -
Prci5g2475 1040 Pfam ATPase family associated with various cellular activities (AAA) 787 917 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g2475 Prci-Chr5 41210942 41229865 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g2475 746 978 Calmodulin-binding Proteins AT3G56690 38.136 2.98e-40 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g2475 - - gmx:100802939 1533.47