Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g2440 ATGGCTCACGGAAGCAAGCGGCTGGAGAAGGATGACGCACCTCCACTGCCGCAGTTTCACCAGTCTGAGAAGCAAGACGGTGATGAAGAAGAGGGCATGGGACAGGAAGAACGTTCCGGGAATCTGCCTTCGGCGGAAGGCGGTAGTGGACTCGAGAGAGGGGAAAAACCAGAAAGATTCGATCTTGACACCGAACAAGCGAAAATAGAGTCATTAACGGAAGTCACCGAAGCTGTCAAGAAAAGCCGCGGCAGAAAACGTAAGTCAGAGACGGAGGCCTCAGGAAACGAGATTTTGGCGGATGTGGCGAGGCGTAGTGCTAGACTAACGCAGAAATCGTACTGTTATGTTTTCTTTGACGAGGAAGATGAAACTAAAAAAGGGCGACGTGTGAGAAGTCGTAAGAAGACGAAAGTTGCGGCAAATGAAACATCAATGATTGAAGAAGGTGTAGGAGTCGAGGACAATGGTGATTTAGGCGGAGAGAAGTTAGGACATTTGGAGCAGGGTGATCCTGGGGGTTCTGCGAAGGGTTGTGCTCTCGAAGGAGGAGAAAGTGGACACAAGAAAATTTCAAAGCGTGGGAAGGCGGTTCATAATGCGAAGGCGGAAAATAAAGTATTGGAGGCTGAGGCTCATGGTCCAATGAAGATGGCTAGATATTCCTCAGAAAGCAGTTCATATAAAGGCTATAGTTTGAGGGCTTCTAAATCTGAAGTTAATAAGCAGGAGACAACCAAAGTAAACAGGCACGATCCTGAATGGATTGAAAAGGAGTGCTTAATGTGCCATCAGTGTCAGAGAAATGATAAGGGGGAGGTTGTTAGGTGTACAAAATGTAAGCGGAAGAGATTTTGCATCCCGTGTTTAAAGAGCTGGTATCCTCAATTGAGAGAGGAAGATATTGCCGAGGAGTGTCCTGTGTGTCGTGGAAACTGCAATTGCAAAGCATGTCTGAGCTCTGATAAATTAATCACAGCAATTAAGGATGCAAAAATCGATGAAAATGTGGAAGTTGAATTCTTTAAGTATTTGCTACCCATGCTTCTTCCATATCTAAGGCAGCTAGATGAAGAACAAATGATCGAGAAGGAGACTGAAGCCAAGCGACAAGGCGTCACACTTTCAGAGCTCCGGGTAGGAAGGACAGATTGTGCAGATAATGAGCGTGTTTACTGTGACAATTGTAAAACTTCAATTTTTGATTGTCACCGAAGCTGTAAAGAATGTTCTTTAGACCTCTGTCTGGTCTGTTGCCGTGAGATTCGTCAGGGGAAATTGGTTGGAGGTGCAGAGCCAGTTGAGTTTGAGTTTATCAGCCGGGGCCTGCACTATATGCATGGTGATACTGAAAAGGGGTCAACAATAACTAAATTAAATGTTGAGACAAAGACTGAGGATCGTGATTGGTCAAGATCTGGCTTGAAGGTTACAAGTGATGGTAGCATCCCTTGTCCAAGGGTTCATGGTGGTTGTGGTTGTAGTTATCTTGAACTTCGATGTATATTTGCTGATAACTGGATTCCTGAACTTGTAAAGAAAGCTGAAAATATGGCCAAAGTGTATAAGCTTGATGATGCAACACGGACAAGTAACCTGTGGTGTTCATGTTTCAACCTAAATGGTAACAACAATGTTGGAAATGAGAATAGGAGGAAGGCTGCTTCTCGTGAAGATCCCAATGTTACTGACAATTATATATACTGTCCAAGGGCTGTAGATCTAGTACCTTTGGATCTGAAGCATTTTCAGTGGCACTGGAGTAAAGGAGAGCCAGTGATTGTCAGCAATGTGCTTGAATGTACATCTGGTTTAAGCTGGGAACCACTTGTCATGTGGCGTGCATTCCGTAAGATAACTAATGCCAAGCATGATCAACATTTGGAAGTAAAGGTCCTTGATTGCTTGGACTGGTGTGAGGGAGACATCAATATACACCAATTCTTTACAGGGTACTCAGAAGGTCGAAAAGATTTTGCTATGGGGCCTCAGTTATTGAAATTGAAAGATTGGCCTCCTTCTAATTTGTTTGAGGAACGACTACCACGACATTGTGCGGAGTTCATTTCTTCCTTACCATACAAGGAATATACAAATCCTCATAAGGGTGTTCTAAACCTTGCTTCAATGTTGCCAGAAGGATACATAAAGCCGGATATTGGTCCCAAGACATATATAGCTTATGGAATTCCCATGGAGCTTGGGCGGGGCGATTCAGTGACAAAGCTTCATTGTGATATGTCTGATGCAGTGAATGTTTTGACTCATACTTTTGAGACGCCCCTTGATGCTGACCTCCTAGCAACAATAGAGGATTTAAAAGAAAAGCACCTTAAACATGACAGAGAGGAGCTATATGGCGATGGTCAGGAAGTAGAAGCTAATGTTGAAAATGGAAAAGCTACAGATTTTGAAAATAAGTTGATTGGATATGATTCTGTGGAGGGAGGTGCTCTCTGGGATGTTTTTAGGAGACAGGATGTCCCTAAACTGCAGGAATACCTTAAGAAGCACTTCAGAGAATTCAGGCATGTCAACTGCATTCCATTGCAGCAGGTTGTTCATTCTATCCATGACCAGACCTTTTATTTGACTATGGATCATAAGAGGAAGCTGAAGGAGGAATATGGAATTGAACCATGGACATTTGTTCAGAAACTGGGAGATGCAGTTTTCATTCCTGCCGGTTGTCCTCACCAAGTCAGAAATCTTAAGTCATGTATCAAGGTTGCTCTCGATTTTGTATCACCTGAAAGTATACATGAGTGTATTCGTTTAACCCAGGAATTTCGCACACTTCCCATAAATCACAAGGCTATTGAGGACAAATTGGAGGTGAAGAAAATGATCATTCACGCAATGAGTAAGGTAGTGGGGACATTGGAGAAAGCAAGGAAGAAAGAAAGCCAAGGCTCAAAGTAA 2922 0.4336 MAHGSKRLEKDDAPPLPQFHQSEKQDGDEEEGMGQEERSGNLPSAEGGSGLERGEKPERFDLDTEQAKIESLTEVTEAVKKSRGRKRKSETEASGNEILADVARRSARLTQKSYCYVFFDEEDETKKGRRVRSRKKTKVAANETSMIEEGVGVEDNGDLGGEKLGHLEQGDPGGSAKGCALEGGESGHKKISKRGKAVHNAKAENKVLEAEAHGPMKMARYSSESSSYKGYSLRASKSEVNKQETTKVNRHDPEWIEKECLMCHQCQRNDKGEVVRCTKCKRKRFCIPCLKSWYPQLREEDIAEECPVCRGNCNCKACLSSDKLITAIKDAKIDENVEVEFFKYLLPMLLPYLRQLDEEQMIEKETEAKRQGVTLSELRVGRTDCADNERVYCDNCKTSIFDCHRSCKECSLDLCLVCCREIRQGKLVGGAEPVEFEFISRGLHYMHGDTEKGSTITKLNVETKTEDRDWSRSGLKVTSDGSIPCPRVHGGCGCSYLELRCIFADNWIPELVKKAENMAKVYKLDDATRTSNLWCSCFNLNGNNNVGNENRRKAASREDPNVTDNYIYCPRAVDLVPLDLKHFQWHWSKGEPVIVSNVLECTSGLSWEPLVMWRAFRKITNAKHDQHLEVKVLDCLDWCEGDINIHQFFTGYSEGRKDFAMGPQLLKLKDWPPSNLFEERLPRHCAEFISSLPYKEYTNPHKGVLNLASMLPEGYIKPDIGPKTYIAYGIPMELGRGDSVTKLHCDMSDAVNVLTHTFETPLDADLLATIEDLKEKHLKHDREELYGDGQEVEANVENGKATDFENKLIGYDSVEGGALWDVFRRQDVPKLQEYLKKHFREFRHVNCIPLQQVVHSIHDQTFYLTMDHKRKLKEEYGIEPWTFVQKLGDAVFIPAGCPHQVRNLKSCIKVALDFVSPESIHECIRLTQEFRTLPINHKAIEDKLEVKKMIIHAMSKVVGTLEKARKKESQGSK 973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g2440 973 MobiDBLite consensus disorder prediction 168 188 - -
Prci5g2440 973 ProSiteProfiles JmjC domain profile. 700 931 IPR003347 -
Prci5g2440 973 Pfam JmjC domain, hydroxylase 814 914 IPR003347 -
Prci5g2440 973 SMART cupin_9 681 931 IPR003347 -
Prci5g2440 973 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 36 969 IPR045109 GO:0032454|GO:0033169
Prci5g2440 973 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 258 325 IPR018866 -
Prci5g2440 973 MobiDBLite consensus disorder prediction 1 97 - -
Prci5g2440 973 FunFam Transcription factor jumonji domain-containing protein 564 940 - -
Prci5g2440 973 ProSiteProfiles Zinc finger RING-type profile. 260 310 IPR001841 -
Prci5g2440 973 MobiDBLite consensus disorder prediction 1 28 - -
Prci5g2440 973 MobiDBLite consensus disorder prediction 51 94 - -
Prci5g2440 973 SUPERFAMILY Clavaminate synthase-like 578 954 - -
Prci5g2440 973 Gene3D Cupin 573 940 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g2440 Prci-Chr5 41000060 41018218 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Prci5g2440 JmjC 2.7e-15 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g2440 K15601 - gmx:100797799 969.918