Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g2433 ATGGAGAATCACACCGCCAACAACACCAAAGCAGTTTCAGGAGGAGTCAAACCCATCAATGACAACGAAGAGCTTTCCAATTTGAATGAACAGGAGCACTCAGAAGAAGTGGATGTAGATGAGAATGGAGGCGGGGCTGAAGAAGAAGGGGAGAGAACTGGATCTGGCTCCATCCAGTCTCCTCCTCGCCCACCTTCCAGAACCCCTTTCACTAATCTCAGTCAGGTCGATGCTGACCTCGCCCTTGCTCGAACCCTTCAGGAGCAGGAAAGGGCATACATGATGCTGAGAATGAACAACGAAGGAAGTGATTATGGAAGTTGGGAAGCTGGCAGCTATTTGCATGATGATGGGGATGATTTTGAAGATCTACATGATGGTACTGATGATGATGAGGACAATGGCCCTGATGATGAAGATGATGACAATAATGATGATGAAGAATATGATGATGAAGATGCATTTGATGCGCATGCTCTTGTTAGTTCTGGTGAAATTGATAATACCAGCATTGAATTTGATCCTGATGTATTCTCTAGTGATGAAGCCTATGCAAGAGCATTACAAGAGGCTGAAGAGAGGGAAATGGCAGCTAGGCTATTAGCTTTGGCTGGGATAAATGATCGGGAAGCTGAGGACACAGAAGACCATGGTGCTAATTCTCCGGATGCATGGGAGGATGTTGATCCCGATGAACTTTCATACGAGGAACTTCTGGCATTGGGTGAAGTTGTTGGAACTGAGAGCAGAGGTCTTTCTACTGAAACTATTGCCTCTTTGCGTTCAGTGAACTACAAGATGGGAAGTGATCAGCATGGAAGCAATGATTCGTGTGTCATATGCCGGGTGGATTATGAGGATGGTGAATCCTTAACTGCACTTTCATGCAAACATTTGTACCATCCTGAGTGCATTAACAATTGGTTGAAAATAAACAAGGTGAAGGCTCTAATGTGA 957 0.4493 MENHTANNTKAVSGGVKPINDNEELSNLNEQEHSEEVDVDENGGGAEEEGERTGSGSIQSPPRPPSRTPFTNLSQVDADLALARTLQEQERAYMMLRMNNEGSDYGSWEAGSYLHDDGDDFEDLHDGTDDDEDNGPDDEDDDNNDDEEYDDEDAFDAHALVSSGEIDNTSIEFDPDVFSSDEAYARALQEAEEREMAARLLALAGINDREAEDTEDHGANSPDAWEDVDPDELSYEELLALGEVVGTESRGLSTETIASLRSVNYKMGSDQHGSNDSCVICRVDYEDGESLTALSCKHLYHPECINNWLKINKVKALM 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g2433 318 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 243 315 IPR013083 -
Prci5g2433 318 MobiDBLite consensus disorder prediction 208 224 - -
Prci5g2433 318 MobiDBLite consensus disorder prediction 122 153 - -
Prci5g2433 318 MobiDBLite consensus disorder prediction 101 153 - -
Prci5g2433 318 Pfam Ring finger domain 276 312 IPR001841 -
Prci5g2433 318 MobiDBLite consensus disorder prediction 1 75 - -
Prci5g2433 318 MobiDBLite consensus disorder prediction 208 228 - -
Prci5g2433 318 SUPERFAMILY RING/U-box 269 314 - -
Prci5g2433 318 MobiDBLite consensus disorder prediction 1 25 - -
Prci5g2433 318 PANTHER E3 UBIQUITIN LIGASE BIG BROTHER-RELATED 29 315 IPR043312 -
Prci5g2433 318 FunFam E3 ubiquitin ligase BIG BROTHER-related 244 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g2433 Prci-Chr5 40983950 40987753 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g2433 51 216 C3H Transcription Factor Family AT3G19910 46.524 3.86e-37 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g2433 K19045 - gmx:100306465 386.726