Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g2423 ATGTCTCAGACATCTGGCCTACTCCCTGCTTACCAGTCTCTGGAAGCATTGCCACCTAATTTTAAGTTCGCAGCCGATCCAACACTTGTTTTTGTGGAAAAACATGAAAACGATGCGCTAGGAAGGGAGGTTTCTGAGGAAGTTCAAGACCTTGCTGGTGATATGGATCTATTTGATGAGGATTCGCCGTATGGTGAAAGAACTACATCATTAGAAAGCAGGCCTTCAGCTGGTGATGATGGCACAGAATCTGCTCCCCAGCCACTCCCCTCAATCTCCTCATCTTCCAATGACCACAAGTGGAGTGATACAACACCTTACGCTTCAAAGAAGAAGATTCATTCTTGGTTTCGACTTCCAAATGGGAATTGGGAGCTGGGGAAGTTAATATCCACTTCTGGGACTGAATCTGTTATCTCACTGCCTGAAGGGAAAGTTTTAAAGGTTAAAGCTGAAAGTTTGGTTCCGGCAAACCCTGATATTCTAGATGGAGTGGATGACCTTATGCAGCTTAGTTATTTGAATGAACCCTCAGTTTTATACAATCTGCAATACAGATACATCCGAAATATGATTTATACAAAAGCAGGGCCCGTTTTGGTTGCAATAAACCCGTTTAAGAAAGTCCCTCTGTATGGAAATGATTATATTAAAGCATACGAGAATAAAGCTATGGAGAGCCCTCATGTATATGCCATTACAGACACTGCCATCCGGGAAATGATAAGAGATGAAGTGAATCAATCTATAATTATAAGTGGTGAAAGTGGAGCAGGGAAGACTGAGACAGCAAAGATAGCAATGCAGTACTTGGCTGCCCTTGGAGGTGGAAGTGGAATAGAGTATGAGATATTAAAGACTAATCCAATACTAGAAGCCTTTGGTAATGCAAAAACATTGAGAAATGACAACTCAAGTCGTTTTGGGAAACTTGTTGAGATTCACTTCAGTGAAACTGGAAAAATATCGGGTGCTAATATTCAAACATTTTTGCTAGAAAAGTCTAGAGTAGTCCAATGCAATGAAGGGGAAAGGTCATATCATATTTTCTATCAGCTGTGTGCTGGGGCACCGCCTTCTCTGAGGGAGAAGCTAAATCTTCAAAGTGCGGAAGGATACAAATATCTGAGGCAGAGCAATTGTTTTTCCATTACTGGCGTTAATGATGCGGAAGAATTTCGCATAGTCATGGAAGCCTTGGATGTTGTCCACATCAACAAAGAAAATCAGGAGAATGTATTTGCAATGCTTGCTGCAGTGTTATGGCTAGGGAACATATCATTCACCGTGATTGATAATGAAAATCATGTTCAACCCGTGGAAGATGAGGGTTTGTTCAACGTTGCTAAATTGATTGGCTGTGACATTGGAGATCTGAAGTTGACTTTATCAACCCGCAAGATGAAAGTTGGTAACGATAACATTGTCCAAAAGTTGACGCTATCACAGGCAATTGATGCAAGAGATGCTTTGGCAAAGTCAATATATGCAAGTCTCTTTGATTGGCTGGTTGAACAAATAAACAATTCACTTGCTGTTGGTAAAATACGCACTGGTAGATCAATCAGTATTTTAGACATCTATGGATTTGAGTCTTTTGAGAGGAACAGTTTTGAGCAGTTCTGCATAAATTATGCAAATGAGAGATTGCAACAACACTTCAATCGTCACTTATTCAAGTTAGAACAAGAGGAATATATACAGGATGGCATTGACTGGGCTAAAGTTGAATTTGAAGACAACCAAGACTGTCTTAATCTTTTTGAAAAGAAGCCACTGGGGTTACTATCCCTTTTAGATGAGGAGTCTACTTTCCCAAATGGTACAGATTTGACATTTGCTAACAAGCTTAGGCAGCATCTGAATTCAAATTCATGTTTCCAAGGAGAACGAGGCAAGGCCTTTGCTGTGTGTCATTATGCAGGGGAGGTCACCTATGATACAACTGGATTTTTGGAGAAGAACAGGGACCTAATGCACTTGGATTCCATTCAACTTTTATCCTCATGTACATGCCAACTTCCTAAGATATTTGCAGCCCATATGCTCTTACAGTCCGAGAAGCCTGTAGTTGGTCCCTTACACAAGTCAGGTGGAGCAGATTCCCAAAAGCTGAGTGTTGCCACAAAATTCAAGTCACCGGGATCATATGAGCAAGGGCTTGTACTTCAGCAACTGAGGTGTTGTGGTGTCCTAGAAGTGGTTCGAATATCAAGATCAGGTTTTCCTACTAGAATGTCTCATCAAAAGTTTGCCCGAAGATATGGTTTTCTTCTCCTTGAAAATGTTGCATCTCAGGATCCACTCAGTGTTTCAGTTGCAATTCTGCATCAGTTTAGTATTTTGCCTGAGATGTATCAAGTTGGCTACACAAAATTATTTTTCCGAACAGGACAGATTGGAGTGCTTGAAGATACTAGGAATCGTACTCTCCATGGCATCTTACGTGTCCAAAGTTGCTTCAGGGGTCACCGAGCACGTTGTTATCACAAGGAGCTTAAGAGAGGAATCACTACTCTCCAGTCATTTGTTAGGGGAGAGAAAACAAGAAGGGAATATGCAGCTTCACTTCAGCGACATAGAGCTGCTGTTCTTATACAGACGCAGATGAAAGCAGTATTTGTGAGAAACAGAATGAAGAATATTTGTGATGCTTCGATAGTCATTCAATCAGCTATTCGTGGTTCGCTGGCCAGAAGATGCTCAGGAGACATGGGATTGTTGAAATCTATAGGGATGAAGACCAACGAGTCAGACGAAGTGCTAGTCAAGGCTTCTTTCCTGACTGAATTACAGCGTCGGGTACTCAAGGCTGAAGCTGCTCTGAGAGTGAAAAAAGAGGAAAATGACATTCTTCACCAGCGTCTCCAACAGTATGAGAGCCGTTGGTCTGAGTATGAATTGAAGATGAAATCAATGGAAGAAGGGTGGCAGAAACAAATGAGATCCCTGCAATCTAGCCTCTCCATTGCAAAAAAGAGCTTAGCAATTGATGATTCCGCGAGAAATTCGGATGCCTCTGTCAATGCAAGTGATGAGAGAGATTACAGTTCAGATATAGGAAGCAACCATAGGCGCCAAGAAAGCAGCTCAAGTGTAGGAAATTATCACAGACGCCAAGAAAGCAATGGGTTTAGATCAATGGGTGCAGGTTTGAACGTCATAGGTGGGTTGGCTCATGAATTGGAGCAGAGGCGTCAAGTGTTTGGTGATGATGCCAAGTTCTTGGTTGAGGTGAAATCCGGTCAAGTGGAGGCAAATTTGAATCCAGACCAGGAGCTTAGAAGGTTGAAACACACGTTTGAAGCTTGGAAGAAAGATTATGCGGCGAGACTACGTGAAACAAAGGCAATTTTACATAAGCTTGGAACTGAAGAAGGTGCAATTGACAAAGTGAAGAAAAGGTGGTGGGGAAGAAGGAACAGTACGAGGTTTGGTTGA 3441 0.4194 MSQTSGLLPAYQSLEALPPNFKFAADPTLVFVEKHENDALGREVSEEVQDLAGDMDLFDEDSPYGERTTSLESRPSAGDDGTESAPQPLPSISSSSNDHKWSDTTPYASKKKIHSWFRLPNGNWELGKLISTSGTESVISLPEGKVLKVKAESLVPANPDILDGVDDLMQLSYLNEPSVLYNLQYRYIRNMIYTKAGPVLVAINPFKKVPLYGNDYIKAYENKAMESPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNAKTLRNDNSSRFGKLVEIHFSETGKISGANIQTFLLEKSRVVQCNEGERSYHIFYQLCAGAPPSLREKLNLQSAEGYKYLRQSNCFSITGVNDAEEFRIVMEALDVVHINKENQENVFAMLAAVLWLGNISFTVIDNENHVQPVEDEGLFNVAKLIGCDIGDLKLTLSTRKMKVGNDNIVQKLTLSQAIDARDALAKSIYASLFDWLVEQINNSLAVGKIRTGRSISILDIYGFESFERNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVEFEDNQDCLNLFEKKPLGLLSLLDEESTFPNGTDLTFANKLRQHLNSNSCFQGERGKAFAVCHYAGEVTYDTTGFLEKNRDLMHLDSIQLLSSCTCQLPKIFAAHMLLQSEKPVVGPLHKSGGADSQKLSVATKFKSPGSYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLENVASQDPLSVSVAILHQFSILPEMYQVGYTKLFFRTGQIGVLEDTRNRTLHGILRVQSCFRGHRARCYHKELKRGITTLQSFVRGEKTRREYAASLQRHRAAVLIQTQMKAVFVRNRMKNICDASIVIQSAIRGSLARRCSGDMGLLKSIGMKTNESDEVLVKASFLTELQRRVLKAEAALRVKKEENDILHQRLQQYESRWSEYELKMKSMEEGWQKQMRSLQSSLSIAKKSLAIDDSARNSDASVNASDERDYSSDIGSNHRRQESSSSVGNYHRRQESNGFRSMGAGLNVIGGLAHELEQRRQVFGDDAKFLVEVKSGQVEANLNPDQELRRLKHTFEAWKKDYAARLRETKAILHKLGTEEGAIDKVKKRWWGRRNSTRFG 1146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g2423 1146 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 110 159 IPR004009 GO:0003774|GO:0005524|GO:0016459
Prci5g2423 1146 Gene3D - 861 903 - -
Prci5g2423 1146 Gene3D - 812 860 - -
Prci5g2423 1146 Gene3D - 345 401 - -
Prci5g2423 1146 Pfam Myosin head (motor domain) 165 712 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci5g2423 1146 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 137 854 IPR027417 -
Prci5g2423 1146 SMART MYSc_2a 157 809 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci5g2423 1146 PANTHER MYOSIN 156 1138 - -
Prci5g2423 1146 ProSiteProfiles IQ motif profile. 833 862 IPR000048 GO:0005515
Prci5g2423 1146 MobiDBLite consensus disorder prediction 1001 1037 - -
Prci5g2423 1146 FunFam Myosin heavy chain 345 401 - -
Prci5g2423 1146 CDD MYSc_Myo8 177 796 IPR036022 -
Prci5g2423 1146 Gene3D Kinesin motor domain 162 741 IPR036961 -
Prci5g2423 1146 PRINTS Myosin heavy chain signature 289 316 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci5g2423 1146 PRINTS Myosin heavy chain signature 521 549 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci5g2423 1146 PRINTS Myosin heavy chain signature 193 212 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci5g2423 1146 PRINTS Myosin heavy chain signature 247 272 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci5g2423 1146 PRINTS Myosin heavy chain signature 574 602 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci5g2423 1146 MobiDBLite consensus disorder prediction 56 104 - -
Prci5g2423 1146 MobiDBLite consensus disorder prediction 1001 1016 - -
Prci5g2423 1146 Gene3D - 533 701 - -
Prci5g2423 1146 MobiDBLite consensus disorder prediction 1023 1037 - -
Prci5g2423 1146 ProSiteProfiles IQ motif profile. 812 839 IPR000048 GO:0005515
Prci5g2423 1146 MobiDBLite consensus disorder prediction 86 103 - -
Prci5g2423 1146 Gene3D Myosin VI head, motor domain, U50 subdomain 402 510 - -
Prci5g2423 1146 ProSiteProfiles Myosin motor domain profile. 163 808 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci5g2423 1146 Gene3D - 742 809 - -
Prci5g2423 1146 Pfam IQ calmodulin-binding motif 885 900 IPR000048 GO:0005515
Prci5g2423 1146 Pfam IQ calmodulin-binding motif 835 853 IPR000048 GO:0005515
Prci5g2423 1146 Pfam IQ calmodulin-binding motif 814 831 IPR000048 GO:0005515
Prci5g2423 1146 SMART iq_5 881 903 IPR000048 GO:0005515
Prci5g2423 1146 SMART iq_5 809 831 IPR000048 GO:0005515
Prci5g2423 1146 SMART iq_5 858 880 IPR000048 GO:0005515
Prci5g2423 1146 SMART iq_5 832 854 IPR000048 GO:0005515
Prci5g2423 1146 ProSiteProfiles IQ motif profile. 884 910 IPR000048 GO:0005515
Prci5g2423 1146 FunFam Unconventional myosin-XIX 533 726 - -
Prci5g2423 1146 Coils Coil 928 962 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g2423 Prci-Chr5 40920936 40935206 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g2423 10 1145 Myosins gene family AT1G50360 72.883 0.0 1715
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g2423 - K10357 gmx:100801124 1876.68