Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g2422 ATGTCTCAGACATCTGGCCTACTCCCTGCTTACCAGTCTCTGGAAGCATTGCCACCTAATTTTAAGTTCGCAGCCGATCCAACACTTGTTTTTGTGGAAAAACATGAAAACGATGCGCTAGGAAGGGAGGTTTCTGAGGAAGTTCAAGACCTTGCTGGTGATATGGATCTATTTGATGAGGATTCGCCGTATGGTGAAAGAACTACATCATTAGAAAGCAGGCCTTCAGCTGGTGATGATGGCACAGAATCTGCTCCCCAGCCACTCCCCTCAATCTCCTCATCTTCCAATGACCACAAGTGGAGTGATACAACACCTTACGCTTCAAAGAAGATTCATTCTTGGTTTCGACTTCCAAATGGGAATTGGGAGCTGGGGAAGTTAATATCCACTTCTGGGACTGAATCTGTTATCTCACTGCCTGAAGGGAAAGTTTTAAAGGTTAAAGCTGAAAGTTTGGTTCCGGCAAACCCTGATATTCTAGATGGAGTGGATGACCTTATGCAGCTTAGTTATTTGAATGAACCCTCAGTTTTATACAATCTGCAATACAGATACATCCGAAATATGATTTATACAAAAGCAGGGCCCGTTTTGGTTGCAATAAACCCGTTTAAGAAAGTCCCTCTGTATGGAAATGATTATATTAAAGCATACGAGAATAAAGCTATGGAGAGCCCTCATGTATATGCCATTACAGACACTGCCATCCGGGAAATGATAAGAGATGAAGTGAATCAATCTATAATTATAAGTGGTGAAAGTGGAGCAGGGAAGACTGAGACAGCAAAGATAGCAATGCAGTACTTGGCTGCCCTTGGAGGTGGAAGTGGAATAGAGTATGAGATATTAAAGACTAATCCAATACTAGAAGCCTTTGGTAATGCAAAAACATTGAGAAATGACAACTCAAGTCGTTTTGGGAAACTTGTTGAGATTCACTTCAGTGAAACTGGAAAAATATCGGGTGCTAATATTCAAACATTTTTGCTAGAAAAGTCTAGAGTAGTCCAATGCAATGAAGGGGAAAGGTCATATCATATTTTCTATCAGCTGTGTGCTGGGGCACCGCCTTCTCTGAGGGAGAAGCTAAATCTTCAAAGTGCGGAAGGATACAAATATCTGAGGCAGAGCAATTGTTTTTCCATTACTGGCGTTAATGATGCGGAAGAATTTCGCATAGTCATGGAAGCCTTGGATGTTGTCCACATCAACAAAGAAAATCAGGAGAATGTATTTGCAATGCTTGCTGCAGTGTTATGGCTAGGGAACATATCATTCACCGTGATTGATAATGAAAATCATGTTCAACCCGTGGAAGATGAGGGTTTGTTCAACGTTGCTAAATTGATTGGCTGTGACATTGGAGATCTGAAGTTGACTTTATCAACCCGCAAGATGAAAGTTGGTAACGATAACATTGTCCAAAAGTTGACGCTATCACAGGCAATTGATGCAAGAGATGCTTTGGCAAAGTCAATATATGCAAGTCTCTTTGATTGGCTGGTTGAACAAATAAACAATTCACTTGCTGTTGGTAAAATACGCACTGGTAGATCAATCAGTATTTTAGACATCTATGGATTTGAGTCTTTTGAGAGGAACAGTTTTGAGCAGTTCTGCATAAATTATGCAAATGAGAGATTGCAACAACACTTCAATCGTCACTTATTCAAGTTAGAACAAGAGGAATATATACAGGATGGCATTGACTGGGCTAAAGTTGAATTTGAAGACAACCAAGACTGTCTTAATCTTTTTGAAAAGAAGCCACTGGGGTTACTATCCCTTTTAGATGAGGAGTCTACTTTCCCAAATGGTACAGATTTGACATTTGCTAACAAGCTTAGGCAGCATCTGAATTCAAATTCATGTTTCCAAGGAGAACGAGGCAAGGCCTTTGCTGTGTGTCATTATGCAGGGGAGGTCACCTATGATACAACTGGATTTTTGGAGAAGAACAGGGACCTAATGCACTTGGATTCCATTCAACTTTTATCCTCATGTACATGCCAACTTCCTAAGATATTTGCAGCCCATATGCTCTTACAGTCCGAGAAGCCTGTAGTTGGTCCCTTACACAAGTCAGGTGGAGCAGATTCCCAAAAGCTGAGTGTTGCCACAAAATTCAAGAGTCAGCTGTTTCAACTGATGCAACGTTTGGAGAGCACCACACCACATTTTATTCGATGTATTAAGCCTAATAACTTCCAGTCACCGGGATCATATGAGCAAGGGCTTGTACTTCAGCAACTGAGGTGTTGTGGTGTCCTAGAAGTGGTTCGAATATCAAGATCAGGTTTTCCTACTAGAATGTCTCATCAAAAGTTTGCCCGAAGATATGGTTTTCTTCTCCTTGAAAATGTTGCATCTCAGGATCCACTCAGTGTTTCAGTTGCAATTCTGCATCAGTTTAGTATTTTGCCTGAGATGTATCAAGTTGGCTACACAAAATTATTTTTCCGAACAGGACAGATTGGAGTGCTTGAAGATACTAGGAATCGTACTCTCCATGGCATCTTACGTGTCCAAAGTTGCTTCAGGGGTCACCGAGCACGTTGTTATCACAAGGAGCTTAAGAGAGGAATCACTACTCTCCAGTCATTTGTTAGGGGAGAGAAAACAAGAAGGGAATATGCAGCTTCACTTCAGCGACATAGAGCTGCTGTTCTTATACAGACGCAGATGAAAGCAGTATTTGTGAGAAACAGAATGAAGAATATTTGTGATGCTTCGATAGTCATTCAATCAGCTATTCGTGGTTCGCTGGCCAGAAGATGCTCAGGAGACATGGGATTGTTGAAATCTATAGGGATGAAGACCAACGAGTCAGACGAAGTGCTAGTCAAGGCTTCTTTCCTGACTGAATTACAGCGTCGGGTACTCAAGGCTGAAGCTGCTCTGAGAGTGAAAAAAGAGGAAAATGACATTCTTCACCAGCGTCTCCAACAGTATGAGAGCCGTTGGTCTGAGTATGAATTGAAGATGAAATCAATGGAAGAAGGGTGGCAGAAACAAATGAGATCCCTGCAATCTAGCCTCTCCATTGCAAAAAAGAGCTTAGCAATTGATGATTCCGCGAGAAATTCGGATGCCTCTGTCAATGCAAGTGATGAGAGAGATTACAGTTCAGATATAGGAAGCAACCATAGGCGCCAAGAAAGCAGCTCAAGTGTAGGAAATTATCACAGACGCCAAGAAAGCAATGGGTTTAGATCAATGGGTGCAGGTTTGAACGTCATAGGTGGGTTGGCTCATGAATTGGAGCAGAGGCGTCAAGTGTTTGGTGATGATGCCAAGTTCTTGGTTGAGGTGAAATCCGGTCAAGTGGAGGCAAATTTGAATCCAGACCAGGAGCTTAGAAGGTTGAAACACACGTTTGAAGCTTGGAAGAAAGATTATGCGGCGAGACTACGTGAAACAAAGGCAATTTTACATAAGCTTGGAACTGAAGAAGGTGCAATTGACAAAGTGAAGAAAAGGTGGTGGGGAAGAAGGAACAGTACGAGGTTTGGTTGA 3519 0.4192 MSQTSGLLPAYQSLEALPPNFKFAADPTLVFVEKHENDALGREVSEEVQDLAGDMDLFDEDSPYGERTTSLESRPSAGDDGTESAPQPLPSISSSSNDHKWSDTTPYASKKIHSWFRLPNGNWELGKLISTSGTESVISLPEGKVLKVKAESLVPANPDILDGVDDLMQLSYLNEPSVLYNLQYRYIRNMIYTKAGPVLVAINPFKKVPLYGNDYIKAYENKAMESPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNAKTLRNDNSSRFGKLVEIHFSETGKISGANIQTFLLEKSRVVQCNEGERSYHIFYQLCAGAPPSLREKLNLQSAEGYKYLRQSNCFSITGVNDAEEFRIVMEALDVVHINKENQENVFAMLAAVLWLGNISFTVIDNENHVQPVEDEGLFNVAKLIGCDIGDLKLTLSTRKMKVGNDNIVQKLTLSQAIDARDALAKSIYASLFDWLVEQINNSLAVGKIRTGRSISILDIYGFESFERNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVEFEDNQDCLNLFEKKPLGLLSLLDEESTFPNGTDLTFANKLRQHLNSNSCFQGERGKAFAVCHYAGEVTYDTTGFLEKNRDLMHLDSIQLLSSCTCQLPKIFAAHMLLQSEKPVVGPLHKSGGADSQKLSVATKFKSQLFQLMQRLESTTPHFIRCIKPNNFQSPGSYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLENVASQDPLSVSVAILHQFSILPEMYQVGYTKLFFRTGQIGVLEDTRNRTLHGILRVQSCFRGHRARCYHKELKRGITTLQSFVRGEKTRREYAASLQRHRAAVLIQTQMKAVFVRNRMKNICDASIVIQSAIRGSLARRCSGDMGLLKSIGMKTNESDEVLVKASFLTELQRRVLKAEAALRVKKEENDILHQRLQQYESRWSEYELKMKSMEEGWQKQMRSLQSSLSIAKKSLAIDDSARNSDASVNASDERDYSSDIGSNHRRQESSSSVGNYHRRQESNGFRSMGAGLNVIGGLAHELEQRRQVFGDDAKFLVEVKSGQVEANLNPDQELRRLKHTFEAWKKDYAARLRETKAILHKLGTEEGAIDKVKKRWWGRRNSTRFG 1172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g2422 1172 SMART iq_5 884 906 IPR000048 GO:0005515
Prci5g2422 1172 SMART iq_5 858 880 IPR000048 GO:0005515
Prci5g2422 1172 SMART iq_5 907 929 IPR000048 GO:0005515
Prci5g2422 1172 SMART iq_5 835 857 IPR000048 GO:0005515
Prci5g2422 1172 ProSiteProfiles IQ motif profile. 859 888 IPR000048 GO:0005515
Prci5g2422 1172 Gene3D - 344 400 - -
Prci5g2422 1172 CDD MYSc_Myo8 176 822 IPR036022 -
Prci5g2422 1172 FunFam Unconventional myosin-XIX 532 724 - -
Prci5g2422 1172 FunFam Myosin heavy chain 344 400 - -
Prci5g2422 1172 Pfam IQ calmodulin-binding motif 840 857 IPR000048 GO:0005515
Prci5g2422 1172 Pfam IQ calmodulin-binding motif 911 926 IPR000048 GO:0005515
Prci5g2422 1172 Pfam IQ calmodulin-binding motif 861 879 IPR000048 GO:0005515
Prci5g2422 1172 ProSiteProfiles IQ motif profile. 910 936 IPR000048 GO:0005515
Prci5g2422 1172 MobiDBLite consensus disorder prediction 1027 1063 - -
Prci5g2422 1172 PRINTS Myosin heavy chain signature 192 211 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci5g2422 1172 PRINTS Myosin heavy chain signature 573 601 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci5g2422 1172 PRINTS Myosin heavy chain signature 246 271 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci5g2422 1172 PRINTS Myosin heavy chain signature 520 548 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci5g2422 1172 PRINTS Myosin heavy chain signature 288 315 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci5g2422 1172 MobiDBLite consensus disorder prediction 86 103 - -
Prci5g2422 1172 ProSiteProfiles Myosin motor domain profile. 162 834 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci5g2422 1172 MobiDBLite consensus disorder prediction 56 103 - -
Prci5g2422 1172 MobiDBLite consensus disorder prediction 1027 1042 - -
Prci5g2422 1172 Coils Coil 954 988 - -
Prci5g2422 1172 Gene3D - 838 886 - -
Prci5g2422 1172 Gene3D - 887 929 - -
Prci5g2422 1172 SMART MYSc_2a 156 835 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci5g2422 1172 Gene3D Myosin VI head, motor domain, U50 subdomain 401 509 - -
Prci5g2422 1172 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 109 158 IPR004009 GO:0003774|GO:0005524|GO:0016459
Prci5g2422 1172 MobiDBLite consensus disorder prediction 1049 1063 - -
Prci5g2422 1172 Gene3D - 768 835 - -
Prci5g2422 1172 Gene3D - 532 724 - -
Prci5g2422 1172 Gene3D Kinesin motor domain 161 767 IPR036961 -
Prci5g2422 1172 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 136 880 IPR027417 -
Prci5g2422 1172 ProSiteProfiles IQ motif profile. 838 865 IPR000048 GO:0005515
Prci5g2422 1172 PANTHER MYOSIN 155 1164 - -
Prci5g2422 1172 Pfam Myosin head (motor domain) 164 822 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g2422 Prci-Chr5 40920936 40935206 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g2422 10 1171 Myosins gene family AT1G50360 74.850 0.0 1779
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g2422 - K10357 gmx:100801124 1936.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci5g2422 5 40920936 40935206 Prci5g2422 5 40920936 40935206 ECH