Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g2408 ATGGCGCCGAAACGTGCTTCTCCTTTGGACGAACCGCCCTCAGCTTCTTCCTCATCCGAAGAAGAGGAAGCTTCATCCGAAGTTGGATCTTCATCTGAAGATGACGATCAACCTTCAAAACTTACACAACCTCTTTCCGCTGAAAAGAAGCCCACTTCCAAAAAGCCTCCACCTGCTGCCCCAATCGCAAAATCTCAGCCAAAAGCTTCGGTTTCGGATTCTGAGACTGAATCTGATGCCGAATCTGACTCCGATGATGAGCGCCCCAGTGAGAATGCGGATCTGATTGTCAAACCCATTGCCTCCAAGCCCAAAGGAGAGACGCCTAAAGGAAAGAAGTCAAAATCTCAGCCATCCGTTACGCCGGCCAAAGCAGCTAACAAGCGACCAAGTGATAACAATCGACCGGCCACTGACTCAAAAAAGGCAAAGAAGGGAAAGGATGCTGGTGGAAACGATGAGATCTTGGCGGCGGAGGAGGATGGGAGAAAGGCCGGAGATGAGTCCAAGAAGCTGTTTCAGAGGCTTTGGAGCGAGGACGACGAGATTGCGATCCTCATGGGTTTAGCGGAATATGCAGCCAAGACAGGAGAAGCCCCGCTTAAGGATATTAATGGATTTCACGATTTCATAAAGAAGTCGGTACATGTTGATGTATCAAATGAACAATTGGCTAATAAGATTAGGACATTGAAGAGAAAGTACGTGAAAAATTCCCAAAAAGGTAAGAATGGTGAAGGCCCCAGTTTCTCCAAACCATACGACAAGAAAGTCTTTGAATTGTCTAAGAAGATCTGGCCTGATGAAGGAGCCAATGGAGGGATAGACCTTACAAAGTCAAATGGGAAAGAGAAGAAAAATAAGAAGGAAGGTAACAGTGTCGTGGCTTCTCGGAAACGAGAGCCTGATCTGGTTTCAGATTCGAAGGAAGTTCGAAAGATAGACATTGATCCGCATGCAGGTTCGCCGCTGAGTTTAAGTGAAATGATTAGGTTTAACAAAAGTCTGGGCCTGTCAGGGTTGGATGATGATGTTATTAAGAGGGGATATGAATTGATTGGAGCATCCAAGAAGGCAGAGTTGGATGACAGGTGGAAGAAACTGCAAATTGCAGAGTTGGAGCTGTTTGTGAAACGAGTTGAGCTTGTCAAGGATGAGGCTAGTTTGATATGGGAGGCAACCAAATCTTCAGGCAATTAG 1200 0.4625 MAPKRASPLDEPPSASSSSEEEEASSEVGSSSEDDDQPSKLTQPLSAEKKPTSKKPPPAAPIAKSQPKASVSDSETESDAESDSDDERPSENADLIVKPIASKPKGETPKGKKSKSQPSVTPAKAANKRPSDNNRPATDSKKAKKGKDAGGNDEILAAEEDGRKAGDESKKLFQRLWSEDDEIAILMGLAEYAAKTGEAPLKDINGFHDFIKKSVHVDVSNEQLANKIRTLKRKYVKNSQKGKNGEGPSFSKPYDKKVFELSKKIWPDEGANGGIDLTKSNGKEKKNKKEGNSVVASRKREPDLVSDSKEVRKIDIDPHAGSPLSLSEMIRFNKSLGLSGLDDDVIKRGYELIGASKKAELDDRWKKLQIAELELFVKRVELVKDEASLIWEATKSSGN 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g2408 399 MobiDBLite consensus disorder prediction 279 306 - -
Prci5g2408 399 PANTHER BNAANNG10740D PROTEIN-RELATED 12 388 IPR007592 GO:0006355
Prci5g2408 399 Pfam Protein of unknown function, DUF573 173 266 IPR007592 GO:0006355
Prci5g2408 399 MobiDBLite consensus disorder prediction 11 49 - -
Prci5g2408 399 MobiDBLite consensus disorder prediction 113 133 - -
Prci5g2408 399 MobiDBLite consensus disorder prediction 272 306 - -
Prci5g2408 399 MobiDBLite consensus disorder prediction 134 168 - -
Prci5g2408 399 MobiDBLite consensus disorder prediction 235 254 - -
Prci5g2408 399 Coils Coil 221 241 - -
Prci5g2408 399 MobiDBLite consensus disorder prediction 1 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g2408 Prci-Chr5 40840002 40841201 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g2408 4 396 GeBP Transcription Factor Family AT1G61730 33.333 6.39e-41 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Prci5g2408 DUF573 8e-33 CL0123