Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g2386 ATGGACGATGATGCGCTGAACATGCGCAATTGGGGTTATTATGAACCCTTCAAAGGGGGTCATCTAGGTCTGCAGCTCATGTCAAGTATGACTGAACGAGACACCAAGCCATTTATGCCAGGCCGAGATCCTACCATGTTAGTTAGTCCAAATGGAAGCTTCCATCCCCGGGAATGTGTTGTGTCAGAATCCTCAATTCCAATTAACTATGTTAGAGACAGTTGGATCAGCCAGAGAGACAGGTTTCTCAATATGTTGCCCACAAATCCTAATTATTCCGTTCTTCCAGAGACATCAGGAGCTCCTTCATTGCAAATTATACAGCCACCCGAAACATCCAGAGATGATAGGGTGAATCAAGTTGAAGACCTTCCTGTTAAAAAGGAAGGTGGCCAATTGAAGAAAAGGCAGAGTGGGGGTGCCCCAAAGACTCCAAAAGCAAAAAAACCAAGGAAGCCAAAGGATAATAGCAATGCTTTGATTCAACGTGAGAAGCCAGCAAGGAAGGCTATGGAGGTTGTGATAAACGGAATTGATATGGACATTTCTGGTCTACCCATTCCTGTCTGCTCGTGTACTGGGGCTCCACAGCAGTGTTATCGATGGGGCTGTGGTGGTTGGCAATCAGCTTGTTGTACCACTAATGTGTCAATGTATCCATTGCCAATGAGCACTAAAAGGCGTGGTGCAAGGATAGCTGGACGGAAAATGAGTCAAGGTGCTTTTAAGAAGGTTTTGGAAAAACTTGCAGCTGAAGGATATAATTTTGCTAATCCTATTGATCTGAGGACTCACTGGGCTAGGCATGGCACAAACAAGTTTGTCACTATCAGGTAA 837 0.4492 MDDDALNMRNWGYYEPFKGGHLGLQLMSSMTERDTKPFMPGRDPTMLVSPNGSFHPRECVVSESSIPINYVRDSWISQRDRFLNMLPTNPNYSVLPETSGAPSLQIIQPPETSRDDRVNQVEDLPVKKEGGQLKKRQSGGAPKTPKAKKPRKPKDNSNALIQREKPARKAMEVVINGIDMDISGLPIPVCSCTGAPQQCYRWGCGGWQSACCTTNVSMYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFANPIDLRTHWARHGTNKFVTIR 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g2386 278 MobiDBLite consensus disorder prediction 94 165 - -
Prci5g2386 278 Pfam GAGA binding protein-like family 1 278 IPR010409 -
Prci5g2386 278 SMART GAGA_bind_2 1 278 IPR010409 -
Prci5g2386 278 MobiDBLite consensus disorder prediction 151 165 - -
Prci5g2386 278 MobiDBLite consensus disorder prediction 115 134 - -
Prci5g2386 278 PANTHER - 1 278 IPR010409 -
Prci5g2386 278 MobiDBLite consensus disorder prediction 94 114 - -
Prci5g2386 278 Coils Coil 272 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g2386 Prci-Chr5 40632885 40634921 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g2386 1 278 BBR or BPC Transcription factor family AT2G01930 58.249 1.63e-110 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Prci5g2386 GAGA_bind 4e-111 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g2386 - - qsu:111986496 478.018