Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g2355 ATGATGACGCCAAATCTGAACTTGCAACCTGAAAATCATTCGGAAGTCAGTAGCCAAGTAGCTTCCAATATATCCTTGCAAGAAACGTCCCATGATCTTACCAAGGACAGCAACACCACTTCTTCCTGTCTCACAAATATCACAAAACCTGAAACTGATCCAGTGTCTTTTTCCCTCGACTTGACCCTCAACGTCAACTCCAGCGATGGTGAGTTGAAACGCACAAGTGATGCCAGCAGTGAAGTGGGAGGTGAAGCTCAACCTTCAGGATCAGCAGTTCCCAGGGTTTTCTCTTGTAATTACTGTAGGAGGAAGTTCTTCAGCTCTCAGGCTTTGGGTGGCCATCAAAATGCTCATAAAAGGGAGAGGACAATGGCGAAGCGCGCGATGCGAATGGGGATGTTCACTGAGAGGTACACAAGCCTGGCATCGCTGCCGCTTCATGGTTCTGCTTTTCGGTCTCTTGGTATTGAAGCTCATGCTGCATTGCACCAACGACCTGTGCCATCACTGAGGCCTCCCGACCCAAGAGTTGGTGCAAAATTTGAGAAAGATTACTTTGGACCAATGTTCATGGAAGATGATGATAATACGGGTCTGTTCTGGCCTGGGAGTTTCCGGCAGGTGGAAGGCAGGGCTGGTGTTAGTATGGGCCATGAACATGCTCAACGTTCAACTACTAGTCTTGCAGCAATTGCGCCGCCACCGCCACTACCACCCCCGCAACCAGAAACATCCACATCACCTGATCTCACTCTGAAGCTCTAA 768 0.4922 MMTPNLNLQPENHSEVSSQVASNISLQETSHDLTKDSNTTSSCLTNITKPETDPVSFSLDLTLNVNSSDGELKRTSDASSEVGGEAQPSGSAVPRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRAMRMGMFTERYTSLASLPLHGSAFRSLGIEAHAALHQRPVPSLRPPDPRVGAKFEKDYFGPMFMEDDDNTGLFWPGSFRQVEGRAGVSMGHEHAQRSTTSLAAIAPPPPLPPPQPETSTSPDLTLKL 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g2355 255 MobiDBLite consensus disorder prediction 68 92 - -
Prci5g2355 255 FunFam Zinc finger protein 2 73 143 - -
Prci5g2355 255 ProSiteProfiles Zinc finger C2H2 type domain profile. 97 124 IPR013087 -
Prci5g2355 255 MobiDBLite consensus disorder prediction 1 49 - -
Prci5g2355 255 MobiDBLite consensus disorder prediction 232 246 - -
Prci5g2355 255 Gene3D Classic Zinc Finger 86 144 - -
Prci5g2355 255 MobiDBLite consensus disorder prediction 213 255 - -
Prci5g2355 255 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 15 169 IPR044246 GO:0009788
Prci5g2355 255 SUPERFAMILY beta-beta-alpha zinc fingers 95 125 IPR036236 -
Prci5g2355 255 ProSitePatterns Zinc finger C2H2 type domain signature. 99 119 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g2355 Prci-Chr5 40431930 40436991 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g2355 91 255 C2H2 Transcription Factor Family AT1G66140 43.915 1.22e-39 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Prci5g2355 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g2355 - - gmx:100775305 343.969