Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g2344 ATGGAGAAACTCCACTCGCGTTTTGGGGTTTCTTTCGTATATCGCATACTGTTGATTCTTTCCATGGTCTTGTCGGCTAGGCCCCAGGACGCCGCGGTTATGGCCATTCTCAAGAACTCGATCAAAGGGTCGAGTTCGCTCCAGTGGTCCGACCCGGATGTCTGCAAATGGTCTCATGTTCAATGCAATTCTGCGAAACGGGTCGCGGCAATTCAGATTGGGAACCTGAACCTACAAGGCTCACTGCCAAAGGAACTCTCTCGACTCACAGAATTACAGCGCTTCGAGTGCCAATCCAACAGTCTCTCAGGGGCATTTCCGTCATTAGCCAGTTCCCTCCAACACCTTTATATTTCAGACAATGGCTTCACCTCTATGCCTCCAGATTTCTTCAAGGGCATGTCTATGTTAGAAGAAGTAAGAATCGACCATAACCCTTTTCCTCCGTGGCAAGTCCCCGACGTACTCAAGGACTGCGTAGCATTGCAAACTTTCTCGGCGCAAAATGTTTCTTTTGTTGGAGAAATTCCTGATATTTTCGGCAAAGATGGTCCATTCCCAGGTTTGACTAAATTGATCCTGTGTTTCAATCAACTTGAAGGTGGATTGCCTTCGAGTTTCTCGGGTAGTTCGATAGAGCTGCTATGGGTCAATGGACAAAAGAGCAGTTCTAAACTTAATGGCACACTTGCGGTGTTCCAGAACCTGACTTCATTGAAACAGATTTGGATTCATGGTAATTCCTTCACTGGTCCTATACCTGACCTTTCGCACCATGATGAATTGTGGGATGTGAGTTTAAGGGATAACCAGTTAACTGGTGTTGTTCCGTCGTCTCTTATGACTCTTGCTAGTTTGCAAGTCGTGAATTTGACTAATAATTATCTTCAAGGACCGATGCCTGCGTTTAAATCAGGAGTACGTGCGGATATAGAGGGGATAAATCAGTTTTGCACGACCAAGCCTGGCCAGCCATGCAGTTCTTTGGTGAACGCTTTATTGTCGGTGGCTGAACCTTTGGGTTATCCATTGAAGTTTGCTCAAAATTGGAAGGGCAATGATCCTTGTGCTGGTAACTGGATAGGGATTGTTTGCACAGGTGGAAATATTACGGTTGTGAATTTTCAGAACATGGGCCTTTCTGGGACTATTTCTCCTAGTTTATCCAGCCTCACATCTGTAAAAAAGTTGCTCCTTGCTAACAATAACCTCACTGGTACCATACCTCGGGAGCTTACTAGCATGCCTGTTTTGCAAGAATTGGACGTTTCGAATAATCATATGTATGGTAAAGTACCAACGTTTCGGCAAGACGTGACTCTTAAAACGGCTGGGAATCCTGATATTGGAAAGGATAGTCCTTCTCCTCCACCGGGATCCCCTAACCCGGATAATACTGAAGGCAATGGTAAGAAACATAATTCAGCAGTCATTATTGTCATTGTTGTGGTGGGGGTTGTCGTTTTACTTGGCGTGCTGCTATGGGGACTCGTTTGGTTCAATAGAAAAAGAAAGCATTCAAAAAAAATTCAGAGTCCAAATGCCGTAGTGATACATCCTCAGCATTCTGGAGACAGAAATCACTTGAAGATCAGTGTTGTAAATGCTGGTACTGGTGCTAATGGAGGAGGAACCAATGGACGGATTACCAGTACTTGTAATGCAGCTGGTGGTGTTGATGTGGTGGAAGCTGGTGGTATGGTAATTTCAATTCAAGTTTTAAGAGAAGCTACCAACAATTTCAGTAAAGAGAACATACTGGGGAAGGGAGGTTTTGGCACCGTGTACAAAGGTGAATTGCATGATGGGACAAAGATTGCAGTGAAGAGAATGGAATCTGGAGTGGAGGGTGTGAAGGGGCTGAGCGAATTCAAGGCTGAGATCACTGTACTCACTAAGGTTCGTCACAAGCATTTGGTTGCTCTCATGGGGTATTGCTTAGATGGAAATGAGAGGCTTCTGGTGTATGAGTACATGCCTCAGGGGACTCTAAGCAGGCATTTGTTCAACTGGAGAGATGAAGGATTAAAGCCACTGGAGTGGACTAGAAGACTTATCATTGCATTGGATGTTGCCAGAGGAGTTGAATACCTTCATGGCTTGGCCCAACAGATTTTCATTCATAGGGATCTCAAACCGTCAAACATCTTGCTTGGTGACGATATGCGAGCTAAAGTGTCTGACTTTGGGTTGGTTCGTCTTGCTCCAGAAGGAAAGGTCTCATTTGAAACTCGACTTGCTGGAACTTTTGGATATTTGGCACCAGAATATGCAGTAACTGGACGAGTAACAACAAAGGTTGATGTCTATAGTTTTGGAGTGATTCTTATGGAGATGATCACTGGGAGGAAAGCGCTTGATGACAGTCAAACCGAAGAGAATGTCCACCTTGTGGCATGGTTTCGGAAAATGGTGCTGAACAAGGACACATTCCGAAAAGCAATTGATCCAGAAATAGAAGTCAGTGAAGAAACTGTATCCAGTATTAACACTGTTGCAGAGTTGGCTGGCCACTGCTGCGCAAGGGAGCCCAGCCAGAGGCCGGACATGGGCCATGCCGTGAACGTGCTCGCGCCTCTTGTGGAGGTCTGGAAGCCTGCAGAAACAAGTTATGATGACATTTGTGGGATTGACCTTGACATGGACCTGCCTCGGGCTCTTAAAAAATGGCAAGCTTTTGAAGGAGTGAGCTCCATCGCCATGGGCATGGTTGCTACTTCATCTTTGGTTTCCAGTGCAGATAGTACACAGTCTAGCATACCCCCGAGGCCATTTGGACTTGGAGCTTCTTTTACTTCTTCAGATGGAAGATGA 2814 0.4556 MEKLHSRFGVSFVYRILLILSMVLSARPQDAAVMAILKNSIKGSSSLQWSDPDVCKWSHVQCNSAKRVAAIQIGNLNLQGSLPKELSRLTELQRFECQSNSLSGAFPSLASSLQHLYISDNGFTSMPPDFFKGMSMLEEVRIDHNPFPPWQVPDVLKDCVALQTFSAQNVSFVGEIPDIFGKDGPFPGLTKLILCFNQLEGGLPSSFSGSSIELLWVNGQKSSSKLNGTLAVFQNLTSLKQIWIHGNSFTGPIPDLSHHDELWDVSLRDNQLTGVVPSSLMTLASLQVVNLTNNYLQGPMPAFKSGVRADIEGINQFCTTKPGQPCSSLVNALLSVAEPLGYPLKFAQNWKGNDPCAGNWIGIVCTGGNITVVNFQNMGLSGTISPSLSSLTSVKKLLLANNNLTGTIPRELTSMPVLQELDVSNNHMYGKVPTFRQDVTLKTAGNPDIGKDSPSPPPGSPNPDNTEGNGKKHNSAVIIVIVVVGVVVLLGVLLWGLVWFNRKRKHSKKIQSPNAVVIHPQHSGDRNHLKISVVNAGTGANGGGTNGRITSTCNAAGGVDVVEAGGMVISIQVLREATNNFSKENILGKGGFGTVYKGELHDGTKIAVKRMESGVEGVKGLSEFKAEITVLTKVRHKHLVALMGYCLDGNERLLVYEYMPQGTLSRHLFNWRDEGLKPLEWTRRLIIALDVARGVEYLHGLAQQIFIHRDLKPSNILLGDDMRAKVSDFGLVRLAPEGKVSFETRLAGTFGYLAPEYAVTGRVTTKVDVYSFGVILMEMITGRKALDDSQTEENVHLVAWFRKMVLNKDTFRKAIDPEIEVSEETVSSINTVAELAGHCCAREPSQRPDMGHAVNVLAPLVEVWKPAETSYDDICGIDLDMDLPRALKKWQAFEGVSSIAMGMVATSSLVSSADSTQSSIPPRPFGLGASFTSSDGR 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g2344 937 Gene3D Ribonuclease Inhibitor 28 323 IPR032675 -
Prci5g2344 937 Pfam Protein kinase domain 582 855 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g2344 937 SMART serkin_6 581 861 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g2344 937 FunFam Receptor-like kinase TMK4 28 323 - -
Prci5g2344 937 SUPERFAMILY L domain-like 37 303 - -
Prci5g2344 937 CDD STKc_IRAK 587 860 - -
Prci5g2344 937 MobiDBLite consensus disorder prediction 913 937 - -
Prci5g2344 937 Pfam Leucine rich repeat N-terminal domain 29 63 IPR013210 -
Prci5g2344 937 Pfam Leucine rich repeat N-terminal domain 331 365 IPR013210 -
Prci5g2344 937 FunFam receptor protein kinase TMK1 544 658 - -
Prci5g2344 937 ProSitePatterns Protein kinases ATP-binding region signature. 587 609 IPR017441 GO:0005524
Prci5g2344 937 PANTHER OSJNBA0070M12.3 PROTEIN 13 937 - -
Prci5g2344 937 Gene3D Ribonuclease Inhibitor 328 453 IPR032675 -
Prci5g2344 937 Gene3D Transferase(Phosphotransferase) domain 1 659 873 - -
Prci5g2344 937 SUPERFAMILY Protein kinase-like (PK-like) 566 857 IPR011009 -
Prci5g2344 937 FunFam Leucine-rich repeat receptor-like kinase 328 452 - -
Prci5g2344 937 FunFam receptor protein kinase TMK1 659 876 - -
Prci5g2344 937 SUPERFAMILY L domain-like 329 435 - -
Prci5g2344 937 MobiDBLite consensus disorder prediction 442 470 - -
Prci5g2344 937 Pfam Leucine Rich Repeat 112 133 IPR001611 GO:0005515
Prci5g2344 937 ProSitePatterns Serine/Threonine protein kinases active-site signature. 706 718 IPR008271 GO:0004672|GO:0006468
Prci5g2344 937 ProSiteProfiles Protein kinase domain profile. 581 861 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g2344 937 Gene3D Phosphorylase Kinase; domain 1 548 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g2344 Prci-Chr5 40342078 40346094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g2344 68 863 Receptor kinase-like Gene Family AT5G07280 31.541 1.05e-86 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Prci5g2344 Pkinase 1.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g2344 K00924 - gmx:100776064 1207.97