Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g2341 ATGGCTCTTCAATTTCTCTTCCTCTGTTTCACCCTCTCCTTCCTCTCCCAAATTCATTTCTCAATTTCCCAGAAAACCATCAATTTTACTTCCTTCAATGCCTCAAACTCCCCATGGTTTCCAAACCAGAATCGCATCCTTCTCTCTCCGAATTCCAATTTCTCGGCTGGCTTCTTCCGCATTTCCTCAGATAATTACACCTTCTCCGTTTGGTTCACCAACATCCCGCGTGACCCCGTCGTATGGTCTGCGAAACTCGGTTCACCGGTCACCGGCTCCGCTTCCCTCGTTATCAACTCCAAAGGCGAGCTTCTTCTCAATAATACCCCCTTGGTAAACGCTTCGTCTACTTCCAATTCCACATCGCCCGTTCTTAGTCTCAGTGACCATGGCAGCTTGAGTTTTGGAGATTGGAATAGCTTCGCTAACCCAACGAACACCATTCTCCCGAACCAAAGTATCACAGGAATCGTGCTTCGTTCCGAAAATGGGCTCTTCAGCTTCGTCAATTCCACGAATCTGACTCTCCATTCCTCCTCTGCTAGTTACTATACCACCCCAAGCCCGTTGGTGAGTATGGACGCTCTCGGCAAGATGACTATGCAGAGTAACGCTTTTCTTACTAGCGATTACGGCGATAATCGTGCCCGGAAAATGGTTCTCGGCAATGATGGGAATCTCAAAATCTACAGTTTCTACCCCGAGCAAGAAAACCGATGGGTTGAGGTTTGGTTGGCGATTTGGGAACCGTGTAAAATCAAAGGCAAATGCGGTCCTTATGCTATATGCTTGCCTTCAACTGGTATAAATGATTCGACTTCATGTGTTTGCCCGCCTGGGTTCACGCAAAATCCAGGATGGCCGGATAAAGGTTGTGCAAGGAAAACCAAACTTACCAATAACATCAAATTTCTGAAGCTGGATTATGTGAACTACACTAACCCCAATATGCGCAGTATTTCTGCCAGAAATTTCACTCTTTGTGAATCTAAATGCAGTGCAGACTCACAATGTCTTGGGTTTGGCTACAAATATGATGGATCTGGTTTTTGTTCTTTAGTACTAGGTGAACTCCAATATGGTTATTGGTCTCCGGGTACTGAGGCCTCACTGTTTCTTAAGGTAGACAAATCCGAATCCGACGCCTCCAATTTCAGTGGGATGACAGAAGTTTTGCAGACATCGTGCCCTGTTCGAATCAGCCTCCCACTGCCCCCTAAAGATTCGAATTCCACGACTCGAAACATTGCCATAATCTGCACTCTTTTCGCTGCTGAGCTCATATCCGGCGTCGCTTTCTTCTGGTCTTTCCTCAAGAGGTACATCAAGTACAGAGACATGGCTACCACTCTCGGACTCGAGTTCCTTCCTGCTGGTGGCCCAAAACGATTCTCGTATGCCGAGCTCAAAACTGCCACCAAGGACTTCTCCAACCTGATCGGAAGAGGTGGGTTCGGCGATGTTTACAAAGGCGAGCTACCGGACCATCGTGTCGTCGCCGTCAAGTGCCTCAAGAATGTCTCAGGCGGCGACGCCGAGTTCTGGGCGGAGGTCACCATCATTGCCAGAATGCACCACCTCAACTTGGTCCGCTTGTGGGGCTTTTGTGCCGAGAAAGGTCAACGAATCTTGGTGTACGAGTACGTCCCAGGCGGGTCACTGGACAAATATCTATTTCGTCGTCCTCGGGCCGGGTCTAAGAACGGGGAACTATCTCCGGATCCGGATCCAAAGCATGACCCGAAGACGGAACAAAAACCCATCCTTGACTGGAATGTCCGGTATAGGATTGCGCTGGGCGTGGCAAGATCCATAGCATACTTACACGAGGAGTGTTTGGAATGGGTCTTGCATTGTGATATCAAGCCCGAGAACATCTTACTGGGCGACGATTTCTGTCCAAAGATCTCAGATTTCGGATTAGCTAAGCTGAGAAAGAAAGAGGATATGGTAACCATGTCTCGGAGGAGAGGGACGCCGGGTTACATGGCTCCGGAATGGATAACGACGGACCCAATCACCTCCAAGGCTGACGTGTACAGCTTTGGGATGGTGTTGCTGGAGCTGGTGAGTGGGGTCAGGAACTTTGAGATTCAAGGATCGTTGTTGAACAGTGATGAATGGTATTTTCCTGGGTGGGCTTTTGAGAAGATGTTCAAGGAGCTGAGGCCCGAAGACATTCTGGACCGTGAGATCAAGCAGTTATATGACAGCAGGGCCCATTTTGATATGATCAATAGGATGGTGAAGACTGCAATGTGGTGCCTTCAAGATAGGCCCGAGATGAGGCCCACCATGGGGAAAGTGGCTAAGATGTTGGAAGGCACGGTGGAGATTTCTGAGCCCAAGAAGCCCACTATCTTTTTCCTCGGAGATGAATAG 2382 0.4882 MALQFLFLCFTLSFLSQIHFSISQKTINFTSFNASNSPWFPNQNRILLSPNSNFSAGFFRISSDNYTFSVWFTNIPRDPVVWSAKLGSPVTGSASLVINSKGELLLNNTPLVNASSTSNSTSPVLSLSDHGSLSFGDWNSFANPTNTILPNQSITGIVLRSENGLFSFVNSTNLTLHSSSASYYTTPSPLVSMDALGKMTMQSNAFLTSDYGDNRARKMVLGNDGNLKIYSFYPEQENRWVEVWLAIWEPCKIKGKCGPYAICLPSTGINDSTSCVCPPGFTQNPGWPDKGCARKTKLTNNIKFLKLDYVNYTNPNMRSISARNFTLCESKCSADSQCLGFGYKYDGSGFCSLVLGELQYGYWSPGTEASLFLKVDKSESDASNFSGMTEVLQTSCPVRISLPLPPKDSNSTTRNIAIICTLFAAELISGVAFFWSFLKRYIKYRDMATTLGLEFLPAGGPKRFSYAELKTATKDFSNLIGRGGFGDVYKGELPDHRVVAVKCLKNVSGGDAEFWAEVTIIARMHHLNLVRLWGFCAEKGQRILVYEYVPGGSLDKYLFRRPRAGSKNGELSPDPDPKHDPKTEQKPILDWNVRYRIALGVARSIAYLHEECLEWVLHCDIKPENILLGDDFCPKISDFGLAKLRKKEDMVTMSRRRGTPGYMAPEWITTDPITSKADVYSFGMVLLELVSGVRNFEIQGSLLNSDEWYFPGWAFEKMFKELRPEDILDREIKQLYDSRAHFDMINRMVKTAMWCLQDRPEMRPTMGKVAKMLEGTVEISEPKKPTIFFLGDE 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g2341 793 FunFam Serine/threonine-protein kinase 549 784 - -
Prci5g2341 793 SUPERFAMILY Protein kinase-like (PK-like) 456 774 IPR011009 -
Prci5g2341 793 SMART blect_4 42 144 IPR001480 -
Prci5g2341 793 CDD STKc_IRAK 480 775 - -
Prci5g2341 793 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 155 IPR036426 -
Prci5g2341 793 CDD EGF 250 282 - -
Prci5g2341 793 ProSiteProfiles PAN/Apple domain profile. 292 376 IPR003609 -
Prci5g2341 793 SMART serkin_6 474 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g2341 793 Pfam Protein kinase domain 478 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g2341 793 ProSitePatterns Protein kinases ATP-binding region signature. 480 502 IPR017441 GO:0005524
Prci5g2341 793 Pfam S-locus glycoprotein domain 205 283 IPR000858 GO:0048544
Prci5g2341 793 Gene3D Phosphorylase Kinase; domain 1 449 548 - -
Prci5g2341 793 ProSiteProfiles Bulb-type lectin domain profile. 32 181 IPR001480 -
Prci5g2341 793 PANTHER OS07G0415500 PROTEIN 7 788 - -
Prci5g2341 793 ProSitePatterns Serine/Threonine protein kinases active-site signature. 616 628 IPR008271 GO:0004672|GO:0006468
Prci5g2341 793 Gene3D Transferase(Phosphotransferase) domain 1 551 785 - -
Prci5g2341 793 FunFam S-receptor-like serine/threonine-protein kinase 446 548 - -
Prci5g2341 793 ProSiteProfiles Protein kinase domain profile. 474 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g2341 793 PIRSF SRK 1 203 IPR024171 GO:0004674
Prci5g2341 793 PIRSF SRK 170 793 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g2341 Prci-Chr5 40296317 40299129 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g2341 310 787 Receptor kinase-like Gene Family AT4G18250 33.467 4.17e-76 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Prci5g2341 Pkinase 1.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g2341 - - lang:109325652 1170.22