Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g2293 ATGGACGACGTGAAGGGTAAATTAAAGGGGTTCATGAAGAAGGTCTCTCAATCACCCTCTGGTAAATTCAAGGGTCAAGGAAGAGTTCTAGGATCATCCTCATCCCCATCTTCATCTTCTTTATCCGGCAGTTCTACTCTTCTCCGTCCTACGCAGAATTCGGGTCCAAAACCAAGTTCTGCGGCGGCGAATTCTCGACCGTTGCCCCAGAAAACGATCGATTCGAAGTTGAATGGGAAGGAAGGTCCGAGTAATTCCAATCCTGATCGCAAACCGATGAACGGGTTTGACCCTTATGATTCATTGATAACTTCTGGGAAGAGATCTAAAAATGGGTATTCTCTGAATATGTATGAATGTCCGATTTGTGGGCGATCATTTATGTCCGAGGAAGAGGTGTCCATACATGTGGATACCTGTCTGGGTAACCCAGTCGAGCTTGATGACGGAAATGGTGTTTCACAATTACCTGGCCATGGAGTTCAGTCAAGAGGTGAATTGGAGGCTTGCATCGGTACGTATATGTCAGGGAAGCCATCTGAGGGTCCAGTTGAAGTTGTTCTGAAACTGTTGAGGAATATTGTAAAGGAACCAGATAACGCGAAGTTTAGGAAAATTAGGTTGACTAATCCAAAGATCAAAGAGGCTGTTAGTGAGGTAGCAGGAGGAATTGAGCTGCTGGGCTGTGTAGGATTTGAGCTAAAGGATGAGGATGGAGAGAGATGGGCAGTGATGGAACTTCCAACAGAAGAACAAATAAAATTGATTAAGAAAGCTATAGCATTATTGGAATCACCAGTACTACAAGAACCTGGAAAGAGAGACAATTTGGCATCTGAAGCATGTGCTGAGATGGAAGAGGCAGAACCTAAAAAGGTGAACAGACAGGTTAAGGTCTTCTTTGCTGTACCAGAAGGCATTGCATCAAAGATTGAACTACCCGATTCTTTCTATAACCTTTCAATTGACGAGGTGAAAAGAGAAGCTGAATTAAGGAGGAAAAAGATTGCGGATTCCCAGCTTTTAATTCCCAAATCACTAAAAGAAAAGCAAGCAAAAGCTGCTAGGAGGAGATACATAAAAGCTATGATTCGGATCCAGTTCCCAGATGGAATGGTGCTTCAAGGTGTATTTAATCCATGGGAACCAACAACTGCTTTATATGAGTTTGCCAGCTCCGCATTGAAAGAGCCAAGTTTGGAATTTGACCTAATGCATCCTGTACTTGTTCAACGACGGGTTATCCCTCATTTTCCTAGACCAGGGGAGAAAGCTGTAACACTGGAGGATGAGGACCTGGTGCCTTCAGCTCTTATCAAGTTAAAACCTCATGAAACGGATTCTGTTGTTTACACAGGCCTCAGAAATGAATTGCTTGAAATCAGTGAACCGCTCTCATGA 1401 0.4354 MDDVKGKLKGFMKKVSQSPSGKFKGQGRVLGSSSSPSSSSLSGSSTLLRPTQNSGPKPSSAAANSRPLPQKTIDSKLNGKEGPSNSNPDRKPMNGFDPYDSLITSGKRSKNGYSLNMYECPICGRSFMSEEEVSIHVDTCLGNPVELDDGNGVSQLPGHGVQSRGELEACIGTYMSGKPSEGPVEVVLKLLRNIVKEPDNAKFRKIRLTNPKIKEAVSEVAGGIELLGCVGFELKDEDGERWAVMELPTEEQIKLIKKAIALLESPVLQEPGKRDNLASEACAEMEEAEPKKVNRQVKVFFAVPEGIASKIELPDSFYNLSIDEVKREAELRRKKIADSQLLIPKSLKEKQAKAARRRYIKAMIRIQFPDGMVLQGVFNPWEPTTALYEFASSALKEPSLEFDLMHPVLVQRRVIPHFPRPGEKAVTLEDEDLVPSALIKLKPHETDSVVYTGLRNELLEISEPLS 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g2293 466 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 2 1 465 - -
Prci5g2293 466 ProSiteProfiles Zinc finger C2H2 type domain profile. 118 136 IPR013087 -
Prci5g2293 466 SUPERFAMILY PUG domain-like 183 264 IPR036339 -
Prci5g2293 466 Gene3D - 180 265 - -
Prci5g2293 466 Gene3D Classic Zinc Finger 114 144 - -
Prci5g2293 466 ProSiteProfiles UBX domain profile. 364 441 IPR001012 GO:0005515
Prci5g2293 466 MobiDBLite consensus disorder prediction 1 103 - -
Prci5g2293 466 FunFam UBX domain-containing protein 6 351 442 - -
Prci5g2293 466 CDD PUB 184 265 - -
Prci5g2293 466 SUPERFAMILY Ubiquitin-like 329 441 IPR029071 -
Prci5g2293 466 Gene3D - 352 444 - -
Prci5g2293 466 MobiDBLite consensus disorder prediction 19 91 - -
Prci5g2293 466 Pfam PUB domain 184 256 IPR018997 -
Prci5g2293 466 SMART PGNneu 182 249 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g2293 1 389 C2H2 Transcription Factor Family AT2G01650 55.838 8.11e-145 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Prci5g2293 PUB 7.2e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g2293 K14011 - qsa:O6P43_025896 611.298