Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g2283 ATGACGACCCACCGCCTCCTCCTTCTCCCCTTCCTCTTCTCATCCACATTCCTCTTCCTCCACCCGTCACCCGCCGCCGCCGACTCCTATGCCACCTCCCCCGCCGAATCTCCTCCTAACTCCACCGATTTCATCCGCACCAGCTGCGGCATCACTCTCTACCCGGACATCTGCTACTCCTCCCTCTCTCGCTACGCCAATGCCGTCCAGCAGAATCCCGGCCAGCTCGCTCGCGTCGCTATCGCCGTCAGTCTCTCCAAGGCTCACCGCATGGCCTCCTACATCTCCAACCTCACTCGGGAAGCCGATTACGCCGCCAACTCGCGCGCCGCCTCCGCCCTCCATGATTGCTTCAGCAACGTGGGAGACGCCGTGGACGAAATTCGCGGTTCCTTGAAGCAGATGCGGCAGATTGGGGCCGCAGGCTCCGGCGAGGAGTCTTTCAAGTTCCAGATGAGCAACGTGCAGACGTGGATGAGCGCGGCGCTGACGGACGAGGAGACCTGTACGGACGGCTTCGAGGACGTGCCAGACAGTCCGGTGAAGGCGGATGTGTGCGGTAAGGTCACGGGCTTGAAGAAGTTCACCAGTAATGCCTTAGCGCTCGTGAATAATTACGCTAACACGGGAACGCCTTGA 639 0.6103 MTTHRLLLLPFLFSSTFLFLHPSPAAADSYATSPAESPPNSTDFIRTSCGITLYPDICYSSLSRYANAVQQNPGQLARVAIAVSLSKAHRMASYISNLTREADYAANSRAASALHDCFSNVGDAVDEIRGSLKQMRQIGAAGSGEESFKFQMSNVQTWMSAALTDEETCTDGFEDVPDSPVKADVCGKVTGLKKFTSNALALVNNYANTGTP 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g2283 212 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 43 206 IPR035513 -
Prci5g2283 212 FunFam Pectin methylesterase inhibitor 1 40 206 - -
Prci5g2283 212 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 206 IPR035513 -
Prci5g2283 212 CDD PMEI-like_3 47 208 - -
Prci5g2283 212 SMART PMEI_2 40 202 IPR006501 GO:0004857
Prci5g2283 212 PANTHER PECTINESTERASE INHIBITOR-LIKE 7 202 - -
Prci5g2283 212 Pfam Plant invertase/pectin methylesterase inhibitor 43 202 IPR006501 GO:0004857
Prci5g2283 212 NCBIfam pectinesterase inhibitor domain 30 206 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g2283 Prci-Chr5 39806890 39807865 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g2283 26 202 Carbohydrate Esterase AT5G53370 29.609 1.66e-15 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g2283 - - gmx:100812251 290.426