Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g2276 ATGACCAAATCTCATACTCATAGTTTTCTTCATAATTTGATTAAACCCTTCAAATTTGGTTCTAAGGGAAGCAACGAAGAAGAGTTAGAGAGGATTGCTGCCCAGGAGCAAAAGATATTTCCCTATGAAACGTTAGTTGCTGCTACCAAAAATTTTCATTCTCATCACAAGCTTGGCGAGGGAGGTTTTGGACCCGTCTACAAGGGGAAGTTGGACGATGGAAGAGAGATTGCGGTGAAGAAGTTATCGCAAAGCTCAAATCAAGGAAACAAAGAGTTCGTGAACGAGGCCAGGTTGCTGGCTCGCGTGCAGCACCGGAATGTGGTGAATTTGTTGGGTTATTGTGTCCATGGCACGGAGAAGCTACTTGTGTATGAGTATGTTGCTCATGAGAGCCTTGACAAACTTCTATTCAAATCCCACAGAAGACAGCAGCTAGATTGGAAAAGGAGGTTTGACATAATCACAGGCATAGCAAGGGGTTTACTTTATCTTCACGAGGACTCGCATAGCTGCATCATCCACCGAGACATCAAGGCCAGTAACATCTTGCTTGATGATAAATGGATGCCCAAGATTGCAGACTTTGGCATGGCTCGTCTCTTCCCTGAGGATCAGACTCATGTCAATACACGGGTGGCTGGCACCAATGGATATATGGCTCCAGAGTATGTGATGCATGGACATTTATCAGTGAAGGCAGATGTGTTTAGCTATGGGGTTTTGGTGCTGGAGCTGATAAGTGGCCAAAGAAACTCAGCGTTTAGCCTTGAGGTGGATGCACATAATCTGCTTGATTGGGCCTACAAGCTTTACAAGAAAGGGAGGAGCTTAGAAATGGTTGACCCTGCGTTAGCAGCTTCAGCAGTAACAGATCAAGTAGCAATGTGCATACAACTGGGTCTGCTATGTGTTCAAGGGGATCCGCGGCTCCGGCCAAACATGCGGCGGGTGGTGGTGATGCTGTCGAAGAAGCCGGGCCACATGGAAGAGCCGACTAGACCAGGAGCGCCTGGTTCCAGATACAGAAGACCTCGCAGGCCCTCTGCATTTTCTACCACAGCCGGTACTTCTGGTGGTGACTCTGATTCTCGTACTTCTGACTCTAGCAATAACTGTACCACCACTGCATCAACACCGGCAACAAGCTCCGCTGCTGCTCGAGAAATTGACGCTCGTGGAAAACGTCCCATGCATGAGGTTTAG 1206 0.4784 MTKSHTHSFLHNLIKPFKFGSKGSNEEELERIAAQEQKIFPYETLVAATKNFHSHHKLGEGGFGPVYKGKLDDGREIAVKKLSQSSNQGNKEFVNEARLLARVQHRNVVNLLGYCVHGTEKLLVYEYVAHESLDKLLFKSHRRQQLDWKRRFDIITGIARGLLYLHEDSHSCIIHRDIKASNILLDDKWMPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSYGVLVLELISGQRNSAFSLEVDAHNLLDWAYKLYKKGRSLEMVDPALAASAVTDQVAMCIQLGLLCVQGDPRLRPNMRRVVVMLSKKPGHMEEPTRPGAPGSRYRRPRRPSAFSTTAGTSGGDSDSRTSDSSNNCTTTASTPATSSAAAREIDARGKRPMHEV 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g2276 401 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 28 377 - -
Prci5g2276 401 MobiDBLite consensus disorder prediction 322 401 - -
Prci5g2276 401 FunFam Cysteine-rich receptor-like protein kinase 10 129 334 - -
Prci5g2276 401 FunFam Cysteine-rich receptor-like protein kinase 10 17 127 - -
Prci5g2276 401 MobiDBLite consensus disorder prediction 350 385 - -
Prci5g2276 401 Pfam Protein tyrosine and serine/threonine kinase 54 321 IPR001245 GO:0004672|GO:0006468
Prci5g2276 401 Gene3D Transferase(Phosphotransferase) domain 1 129 333 - -
Prci5g2276 401 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Prci5g2276 401 CDD STKc_IRAK 58 324 - -
Prci5g2276 401 SUPERFAMILY Protein kinase-like (PK-like) 37 333 IPR011009 -
Prci5g2276 401 Gene3D Phosphorylase Kinase; domain 1 18 127 - -
Prci5g2276 401 SMART serkin_6 52 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g2276 401 ProSiteProfiles Protein kinase domain profile. 52 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g2276 Prci-Chr5 39735373 39739673 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g2276 22 336 Receptor kinase-like Gene Family AT4G11530 49.842 7.18e-110 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci5g2276 PK_Tyr_Ser-Thr 5.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g2276 - - zju:107429294 590.497