Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g2275 ATGACCAAATCTCACAGTTTTCTTCATAATCTGATTAAACCCTTCAAATTCGGTTCTAGTAAAGAGGGAAGCGACGAAGAAGAGTTAGGGAGAACTGCATCCCCGCGGCAAAAGATATTTCCTTATGAAACCTTAGTTGCTGCCACAAAAAATTTTCATTCCCGCCATAAGCTTGGCGAGGGAGGTTTTGGATCCGTCTACAAGTTGGACGATGGAAGAAGGATTGCGGTGAAGAGATTATCACAAAGCTCCAATCAAAGTCAAAGGATCGAAAAGTTCATGAACGAGGCCAGGTTGTTGGCTCGCGTGCACCACCCGAATGTGGTGAATTTGTTGGGTTATTGTGTCCATGGCACAACGAAGCTACTTGTGTATGACTACCTTCCTCTGGGGAGCCTCGAGAAAAATTCATTTGAATCCCACGTCAGAAAGCAGCTAGATTGGAAAAGGAGGTTTGACATAATCACAGGCATAGCAAGTGGCTTGCTCTATCTTCACAAAGACTCGAATATCCCCATCATCCACCGAAACATCAAGCCGAGAAGTATTTTGCTCGACGACAATTGGATGCCCAAGATTGCAAACTTTGACATCGCTCATCTGAGTTATCTCTTCCCCGAGGATCAAACTCATGTCACTACGCGAATCATGGGCACCATGCATACGAACTTTACAGGGAAAACAGGAGTTTAG 693 0.4473 MTKSHSFLHNLIKPFKFGSSKEGSDEEELGRTASPRQKIFPYETLVAATKNFHSRHKLGEGGFGSVYKLDDGRRIAVKRLSQSSNQSQRIEKFMNEARLLARVHHPNVVNLLGYCVHGTTKLLVYDYLPLGSLEKNSFESHVRKQLDWKRRFDIITGIASGLLYLHKDSNIPIIHRNIKPRSILLDDNWMPKIANFDIAHLSYLFPEDQTHVTTRIMGTMHTNFTGKTGV 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g2275 230 ProSitePatterns Protein kinases ATP-binding region signature. 58 78 IPR017441 GO:0005524
Prci5g2275 230 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 26 220 - -
Prci5g2275 230 ProSiteProfiles Protein kinase domain profile. 52 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g2275 230 Gene3D Transferase(Phosphotransferase) domain 1 129 222 - -
Prci5g2275 230 SUPERFAMILY Protein kinase-like (PK-like) 33 220 IPR011009 -
Prci5g2275 230 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 27 127 - -
Prci5g2275 230 Pfam Protein tyrosine and serine/threonine kinase 54 202 IPR001245 GO:0004672|GO:0006468
Prci5g2275 230 FunFam Os07g0541700 protein 128 219 - -
Prci5g2275 230 Gene3D Phosphorylase Kinase; domain 1 16 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g2275 Prci-Chr5 39720094 39724029 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g2275 20 219 Receptor kinase-like Gene Family AT4G05200 45.813 2.42e-49 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci5g2275 PK_Tyr_Ser-Thr 4.1e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g2275 - - pcin:129310995 447.588