Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g2258 ATGAAAAGAGAGCATCATCAGCTCTGTCCCAACCCGGGCGACCCATTCATGACCGCCAGCTCTAGCGGGAAATCCAAGCTATGGGAAGATGAGGCTCAAGACGGTGGCATGGACGAGCTTCTCGCCGTGCTTGGCTACAAGGTGAGGTCGTCGGACATGGCGGATGTTGCCCAGAAGCTCGAACAGCTAGAAGAAGCTATGGGTAATGTTCAGGGCGGTATCTCTCAGCTCTCCTCTGAAACTGTCCATTACAACCCTTCTGATCTATCTACCTGGCTTGAAAGCATGCTTTCTGAGCTCAACCCATCTCCCAATTTCGACTCTTTGACTGCCGTCGCCGGCGCCGTCTCTGCGCCCCCCCTCCCTGCGCCTCCGCCTCCTCAGGCTGATGATTCCTCGTTCTTGGCTCCAGCTGAGTCATCAACTGTTACCTCCATTGACTTCACTGACCATAGCCAGCACCAACATTTGAATCCTCTTCCTCTGCATAAGCACCAAGATAGCTTAATCTTCGAAGACGCATCTTCCTCTGATTATGATCTCAAGGCTATTCCTGGCCAAGCTATCTACAACAGTCAAACTCAAGCCCAGCACCCGCAGCAACTCGAATCTCCTTCCCGAGAAAGCAAACGTTTGAAACCCTCTTCCACTGTGTTCAACCCTGCATTGTTCTTGCCCTCTTCTCTGGGCTCTTTTACCTTGACAAATGAGTCGACCCGTCCTGTTGTCCTCGTCGACTCGCAAGAAAACGGAATTCGACTCGTTCATGCGTTGATGGCTTGCGCGGATGCCGTACACCAGAACAATTTCGCTCTTGCGGAAGCTTTAGTCAAACAGATCGGATTCCTCGCGGTGTCTCAGGCCGGAGCGATGCGCAAGGTTGCGACCTACTTCGCCGAAGCGCTTGCTCGCCGCATATATCGGCTTTACCCAGAAAACCCCCTCGACCATTCTCTTTCCGACATGCTACAGATTCACTTCTACGAGACCTGTCCATATCTCAAATTCGCCCATTTCACCGCCAACCAGGCTATCCTGGAAGCCTTCCAAGGCAAAAGGCGAGTTCATGTCATCGATTTCAGTATGAATCAAGGGATGCAATGGCCGGCTCTCATGCAAGCACTGGCTCTCCGACCCGGCGGACCACCGGCGTTTCGGTTAACAGGAATCGGACCACCCGCACCGGATAATTCAGATCACCTTCAGGAAGTTGGTTGGAAACTCGCCCAGCTAGCAGAAACGATTCACGTTAAATTTGAGTACAGAGGGTTCGTGGCGAACAGTTTAGCTGATCTAGATGCTTCGATGCTCGACCTCAGACCGAGTGAGGTGGAGTCAGTGGCTGTTAACTCGGTGTTCGAGCTTCACAAACTGTTGGCGCGACCCGGTGCGATCGATAAGGTGTTATCAGTGGTGAAGCAGATGAAGCCGGAGATAGTCACCGTCGTAGAGCAAGAAGCGAACCACAATGGACCGGGTTTCCTGGACCGGTTCACGGAGTCACTGCACTATTACTCGACCCTGTTTGACTCGTTGGAGGGATCAGTGGACACTCAGGACAAGATCATGTCGGAGGTGTATCTGGGGAAGCAAATCTGTAACGTGGTTGCCTGCGAAGGGGCGGACCGGATTGAGAGGCATGAGACGCTGAGCCAGTGGCGGAACCGGTTGGGTTCTGCCGGGTTCGCTCCGGTTCACCTGGGTTCCAACGCTTTCAAACAAGCAAGCATGCTCCTGGCTCTCTTCGCCGGTGGAGATGGTTACAGAGTAGAAGAGAACGATGGGTGTCTGCTGCTGGGCTGGCATACTCGGCCATTGATCGCGACGTCGGCGTGGCGACTCGCCTAG 1848 0.5368 MKREHHQLCPNPGDPFMTASSSGKSKLWEDEAQDGGMDELLAVLGYKVRSSDMADVAQKLEQLEEAMGNVQGGISQLSSETVHYNPSDLSTWLESMLSELNPSPNFDSLTAVAGAVSAPPLPAPPPPQADDSSFLAPAESSTVTSIDFTDHSQHQHLNPLPLHKHQDSLIFEDASSSDYDLKAIPGQAIYNSQTQAQHPQQLESPSRESKRLKPSSTVFNPALFLPSSLGSFTLTNESTRPVVLVDSQENGIRLVHALMACADAVHQNNFALAEALVKQIGFLAVSQAGAMRKVATYFAEALARRIYRLYPENPLDHSLSDMLQIHFYETCPYLKFAHFTANQAILEAFQGKRRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAPDNSDHLQEVGWKLAQLAETIHVKFEYRGFVANSLADLDASMLDLRPSEVESVAVNSVFELHKLLARPGAIDKVLSVVKQMKPEIVTVVEQEANHNGPGFLDRFTESLHYYSTLFDSLEGSVDTQDKIMSEVYLGKQICNVVACEGADRIERHETLSQWRNRLGSAGFAPVHLGSNAFKQASMLLALFAGGDGYRVEENDGCLLLGWHTRPLIATSAWRLA 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g2258 615 Pfam GRAS domain family 254 613 IPR005202 -
Prci5g2258 615 Pfam Transcriptional regulator DELLA protein N terminal 38 104 IPR021914 -
Prci5g2258 615 MobiDBLite consensus disorder prediction 194 213 - -
Prci5g2258 615 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 196 609 IPR005202 -
Prci5g2258 615 FunFam DELLA protein GAI 36 100 - -
Prci5g2258 615 Gene3D - 36 100 IPR038088 -
Prci5g2258 615 SMART DELLA_2 38 110 - -
Prci5g2258 615 ProSiteProfiles GRAS family profile. 245 613 IPR005202 -
Prci5g2258 615 MobiDBLite consensus disorder prediction 1 28 - -
Prci5g2258 615 Coils Coil 60 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g2258 Prci-Chr5 39614004 39616547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g2258 1 615 GRAS Transcription Factor Family AT2G01570 63.679 0.0 768
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Prci5g2258 GRAS 8.1e-138 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g2258 K14494 - qsa:O6P43_032550 957.977