Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Prci5g2255 | ATGGATAACATTCTGGGTCTTCTCAAACTTCGTATCAAAAGAGGTATTTCGCTCGCAATTCGTGATACTCGTAGCAGTGATCCTTATGTCGTTGTCACCTTGGGCGACCAGAAAGTGAAGACCCGTGTCGTGAAGAATAATCGCAACCCTCAGTGGGACGATGAATTGACACTCTCTGTTAAGGATGTCAACTCTCCAATTCATCTAGCAGTTTTTGACCAAGACACGTTCACCGTGGATGACAAAATGGGGGATGCAGAGATAGACATAAAGCCATATCTTCAGTGTCTGAAGATGAACTTGACCAACCTCCCAAATGGTTGTATAGTGAAGAGAATTGAGCCAGATGGGAGAAACTACCTTTCTGAGCAGAGCAGCTGCATATGGAAGAATGGAAAAATCACCCAAGAAATGACTCTTGCATTGAGAAACGTGGAATGCGGCTATGTAGTGGTAGAGATTGAGTGGAAGGAAGTTCCAGGTTGCAAGGGCTTATCTGGGATTGAGATCTAA | 513 | 0.4425 | MDNILGLLKLRIKRGISLAIRDTRSSDPYVVVTLGDQKVKTRVVKNNRNPQWDDELTLSVKDVNSPIHLAVFDQDTFTVDDKMGDAEIDIKPYLQCLKMNLTNLPNGCIVKRIEPDGRNYLSEQSSCIWKNGKITQEMTLALRNVECGYVVVEIEWKEVPGCKGLSGIEI | 170 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Prci5g2255 | 170 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4 | 3 | 163 | IPR044562 | - | |
| Prci5g2255 | 170 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 2 | 91 | IPR035892 | - | |
| Prci5g2255 | 170 | Gene3D | C2 domain | 3 | 161 | IPR035892 | - | |
| Prci5g2255 | 170 | ProSiteProfiles | C2 domain profile. | 1 | 103 | IPR000008 | - | |
| Prci5g2255 | 170 | Pfam | C2 domain | 7 | 92 | IPR000008 | - | |
| Prci5g2255 | 170 | SMART | C2_3c | 7 | 102 | IPR000008 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Prci5g2255 | Prci-Chr5 | 39573397 | 39575806 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Prci5g2255 | 38 | 166 | C2H2 Transcription Factor Family | AT1G70790 | 59.542 | 1.15e-52 | 163 |