Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g2255 ATGGATAACATTCTGGGTCTTCTCAAACTTCGTATCAAAAGAGGTATTTCGCTCGCAATTCGTGATACTCGTAGCAGTGATCCTTATGTCGTTGTCACCTTGGGCGACCAGAAAGTGAAGACCCGTGTCGTGAAGAATAATCGCAACCCTCAGTGGGACGATGAATTGACACTCTCTGTTAAGGATGTCAACTCTCCAATTCATCTAGCAGTTTTTGACCAAGACACGTTCACCGTGGATGACAAAATGGGGGATGCAGAGATAGACATAAAGCCATATCTTCAGTGTCTGAAGATGAACTTGACCAACCTCCCAAATGGTTGTATAGTGAAGAGAATTGAGCCAGATGGGAGAAACTACCTTTCTGAGCAGAGCAGCTGCATATGGAAGAATGGAAAAATCACCCAAGAAATGACTCTTGCATTGAGAAACGTGGAATGCGGCTATGTAGTGGTAGAGATTGAGTGGAAGGAAGTTCCAGGTTGCAAGGGCTTATCTGGGATTGAGATCTAA 513 0.4425 MDNILGLLKLRIKRGISLAIRDTRSSDPYVVVTLGDQKVKTRVVKNNRNPQWDDELTLSVKDVNSPIHLAVFDQDTFTVDDKMGDAEIDIKPYLQCLKMNLTNLPNGCIVKRIEPDGRNYLSEQSSCIWKNGKITQEMTLALRNVECGYVVVEIEWKEVPGCKGLSGIEI 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g2255 170 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 3 163 IPR044562 -
Prci5g2255 170 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 91 IPR035892 -
Prci5g2255 170 Gene3D C2 domain 3 161 IPR035892 -
Prci5g2255 170 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Prci5g2255 170 Pfam C2 domain 7 92 IPR000008 -
Prci5g2255 170 SMART C2_3c 7 102 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g2255 Prci-Chr5 39573397 39575806 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g2255 38 166 C2H2 Transcription Factor Family AT1G70790 59.542 1.15e-52 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g2255 - - qsa:O6P43_032566 264.233