Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g2225 ATGAACCGAGTACCGTCATCAGAAGAGGAATGGATAACAATGGAAGAGGAAGAAGAAAGCAGTAACGGAGGAGGAGGTCCTCCGCGTAAGAAACTCCGTCTGACCAAGGAACAGTCTCGTCTCCTCGAGGACAGCTTCAGACAAAACCACACTCTGAACCCAAAGCAGAAGGAATCATTGGCAAAGCAGCTGAATCTGCGAGCCAGGCAGGTGGAAGTGTGGTTTCAGAACCGTAGGGCCAGGAGCAAGCTGAAGCAGACAGAGATGGAGTGCGAGTACTTGAAGAGATGGTTCGGATCCCTGACAGAGCAGAACAGAAGACTGCGCAAGGAGGTGGAGCAGCTCAGGGCCATGAAAGTGGGTCCCCCGACCGTGATCTCTCCCCACAGTTGCCACCCGCTCCCCGCCTCCACCCTCACCATGTGCCCTCGCTGCGAGAAGGTCACCGCCACCGCCACCCCCGCCGCCGACACCGGCCCCACCGTCTCCTCCTCCCTCCTATAA 504 0.5754 MNRVPSSEEEWITMEEEEESSNGGGGPPRKKLRLTKEQSRLLEDSFRQNHTLNPKQKESLAKQLNLRARQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLRKEVEQLRAMKVGPPTVISPHSCHPLPASTLTMCPRCEKVTATATPAADTGPTVSSSLL 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g2225 167 FunFam Homeobox-leucine zipper protein 18 13 90 - -
Prci5g2225 167 CDD homeodomain 28 86 IPR001356 GO:0003677
Prci5g2225 167 SMART halz 85 128 IPR003106 GO:0006355|GO:0043565
Prci5g2225 167 Pfam Homeobox associated leucine zipper 85 119 IPR003106 GO:0006355|GO:0043565
Prci5g2225 167 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 16 157 - -
Prci5g2225 167 ProSitePatterns 'Homeobox' domain signature. 60 83 IPR017970 GO:0000981|GO:0006355
Prci5g2225 167 SMART HOX_1 27 89 IPR001356 GO:0003677
Prci5g2225 167 Gene3D - 21 92 - -
Prci5g2225 167 MobiDBLite consensus disorder prediction 1 38 - -
Prci5g2225 167 ProSiteProfiles 'Homeobox' domain profile. 25 85 IPR001356 GO:0003677
Prci5g2225 167 SUPERFAMILY Homeodomain-like 17 86 IPR009057 -
Prci5g2225 167 Coils Coil 98 118 - -
Prci5g2225 167 Pfam Homeodomain 29 83 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g2225 Prci-Chr5 39393846 39396638 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g2225 1 149 Homeobox Transcription Factor Family AT1G70920 63.636 2.12e-56 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Prci5g2225 Homeodomain 2.8e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g2225 K09338 - csin:114261336 249.21