Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g2220 ATGGACGCTGATTCTGACGCAGTAAGCTGCTCATCATCATACTACAGCATTCTCGGTGTCGATTCGGATTCTTCTCTTGAAGAAATAAGGCGCGCTTATCGTAAGCTGGCAATGCGATGGCATCCGGATAGGTGGACAAGGACACCTTCTCTACTGGGTGAGGCAAAACGAAAGTTCCAGCAAATCCAGGAAGCCTATTCAGTATTATCGGACCAAAGCAAAAGAACGATGTACGATGCAGGCTTGTACGATCCCCAAGAAGAAGAGGATGAGGGGTTTTATGATTTTGTGCAAGAACTGAAGACGCAAGTGAGCAGAGAGGAACGGGTATACAGTATAGAGGAGTTGCAGAGCATGCTAATGGAAATGGTTCAAGGATTCGAGGATTCTTCATGGCATTTCGGAACCTCACCGGTCGAAGAGGAAAGCCAGTGCTCAAAGAGGGCCCGGCGGGATTCGAAGGCCAATGTAGGGTCACATTTTCAGGAGCCTGGGTTTCATTTCTATGAAACGAGGGGTTACTGTAGCTAG 531 0.4802 MDADSDAVSCSSSYYSILGVDSDSSLEEIRRAYRKLAMRWHPDRWTRTPSLLGEAKRKFQQIQEAYSVLSDQSKRTMYDAGLYDPQEEEDEGFYDFVQELKTQVSREERVYSIEELQSMLMEMVQGFEDSSWHFGTSPVEEESQCSKRARRDSKANVGSHFQEPGFHFYETRGYCS 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g2220 176 SMART dnaj_3 12 74 IPR001623 -
Prci5g2220 176 ProSiteProfiles dnaJ domain profile. 13 82 IPR001623 -
Prci5g2220 176 ProSitePatterns Nt-dnaJ domain signature. 59 78 IPR018253 -
Prci5g2220 176 CDD DnaJ 14 71 IPR001623 -
Prci5g2220 176 SUPERFAMILY Chaperone J-domain 12 85 IPR036869 -
Prci5g2220 176 Gene3D DnaJ domain 3 110 IPR036869 -
Prci5g2220 176 Pfam DnaJ domain 14 79 IPR001623 -
Prci5g2220 176 PANTHER PUTATIVE, EXPRESSED-RELATED 11 145 - -
Prci5g2220 176 PRINTS DnaJ domain signature 54 74 IPR001623 -
Prci5g2220 176 PRINTS DnaJ domain signature 33 48 IPR001623 -
Prci5g2220 176 PRINTS DnaJ domain signature 15 33 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g2220 Prci-Chr5 39356609 39359049 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g2220 14 80 C2H2 Transcription Factor Family AT1G74250 42.647 5.35e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g2220 - - cave:132179323 223.402