LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci5g2217	ATGGAAGAGTTCTGGAAAGACATTAATCACGTTCCTCTCATCAGTCCCCACTATGTTCCTTCCTCTTCCTCCTCATCACCCTCTCCTTCTCCTTCTTCAGCCTCCAAGCTCCATGGATTCCTCGCCCAGCCCCCTCGCATTGACTCGTCTTCTTCCTCTTCTGCTAATCCCAAATTTGCCTCCTCCGCTTCTCTTGTCCCTTGCTCCACCCACAAGAGGCTCTCCGAATCTGACTGCGACAGGCGAAGCAAGCGTATGATCAAGAACCGCGAATCCGCTGCTCGATCTAGGGCTCGCAAGCAGGCTTACACGAATGAGTTGGAGCAAGAACTCGCTCTCTTAAAGGAAGAGAATGCGATGCTCACAGAACAGCTACAACGGATGGATGATGCTCCTACAACGAGCGAACAGAAGCTGAAGAAGCCTCCGTCTCGAACATTGACTGCTCCATTTTAA	456	0.5132	MEEFWKDINHVPLISPHYVPSSSSSSPSPSPSSASKLHGFLAQPPRIDSSSSSSANPKFASSASLVPCSTHKRLSESDCDRRSKRMIKNRESAARSRARKQAYTNELEQELALLKEENAMLTEQLQRMDDAPTTSEQKLKKPPSRTLTAPF	151

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci5g2217	151	ProSitePatterns	Basic-leucine zipper (bZIP) domain signature.	84	99	IPR004827	GO:0003700\|GO:0006355
	Prci5g2217	151	MobiDBLite	consensus disorder prediction	45	71	-	-
	Prci5g2217	151	MobiDBLite	consensus disorder prediction	14	102	-	-
	Prci5g2217	151	SUPERFAMILY	Leucine zipper domain	81	130	IPR046347	GO:0003700\|GO:0006355
	Prci5g2217	151	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	79	128	IPR004827	GO:0003700\|GO:0006355
	Prci5g2217	151	MobiDBLite	consensus disorder prediction	127	142	-	-
	Prci5g2217	151	SMART	brlzneu	77	141	IPR004827	GO:0003700\|GO:0006355
	Prci5g2217	151	MobiDBLite	consensus disorder prediction	122	151	-	-
	Prci5g2217	151	CDD	bZIP_plant_BZIP46	81	125	-	-
	Prci5g2217	151	Pfam	bZIP transcription factor	81	131	IPR004827	GO:0003700\|GO:0006355
	Prci5g2217	151	PANTHER	CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED	49	150	IPR043452	GO:0003700\|GO:0045893
	Prci5g2217	151	MobiDBLite	consensus disorder prediction	73	102	-	-
	Prci5g2217	151	Gene3D	-	80	133	-	-
	Prci5g2217	151	Coils	Coil	97	131	-	-
	Prci5g2217	151	MobiDBLite	consensus disorder prediction	16	37	-	-
	Prci5g2217	151	FunFam	ABSCISIC ACID-INSENSITIVE 5-like protein 2	79	138	-	-
	Prci5g2217	151	PRINTS	cAMP response element binding (CREB) protein signature	76	92	-	-
	Prci5g2217	151	PRINTS	cAMP response element binding (CREB) protein signature	114	131	-	-
	Prci5g2217	151	PRINTS	cAMP response element binding (CREB) protein signature	94	114	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci5g2217	Prci-Chr5	39345517	39346627	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci5g2217	76	142	bZIP Transcription Factor Family	AT2G36270	58.209	3.13e-15	69.7

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Prci5g2217		bZIP_1	5.6e-15	CL0018

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci5g2217	K14432		-	sspl:121767937	90.5077