Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g2214 ATGGATTTTCTGGCAAATCCATGTCCTTTGCCTCTCTCTCTGCTGTTTTCGTTCCGGAATTTCGTCGAAAGGGTGAAACAGATTAGCAGTCTCGCGTTTTCTGCCATCGTGGGGAACATCTTCTCTGCGATCTTGACCTTCTGCTTTGCCTTAGTGGGAACGTTGTTGGGGGCTATGACTGGAGCGTTGATAGGCCAAGAGACAGAGAGTGGCTTCATTAGAGGAGCTGCTGTAGGAGCCATATCAGGAGCTGTGTTTTCCATTGAAGTGTTTGAATCTTCTCTTGTTCTTTGGCAAACAGACGAATCTGGTATCGGGTGCCTCTTGTACTTGATTGACGTTATTACTAGCCTACTGAGTGGGAGACTTGTCCGTGAGAGGATAGGTCCTGCCATGCTAAGTGCTGTCCAAAGCCAGATGGGCGCTGTTGAAGCAAGCTTTGATGAGATTCAAAACCTCTTTGACACTGGAGGAGCCAAAGGTTTATCAGGAGATTTAGTTGAAAAAATTCCAATAATAACAATCACAAGTGACGACAATATGGATGCTTGTGGTGAACGAGTTTCCTGTTCAGTTTGCCTCCAGGACTTTCAGCTCGGAGAGACAGTTAGAATATTGCCTCATTGTCATCACCTGTTTCACCTACCTTGTATAGACAAGTGGCTCTTCAGGCATGGTTCTTGCCCATTATGCAGAAGAGATCTGTAA 708 0.4576 MDFLANPCPLPLSLLFSFRNFVERVKQISSLAFSAIVGNIFSAILTFCFALVGTLLGAMTGALIGQETESGFIRGAAVGAISGAVFSIEVFESSLVLWQTDESGIGCLLYLIDVITSLLSGRLVRERIGPAMLSAVQSQMGAVEASFDEIQNLFDTGGAKGLSGDLVEKIPIITITSDDNMDACGERVSCSVCLQDFQLGETVRILPHCHHLFHLPCIDKWLFRHGSCPLCRRDL 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g2214 235 Pfam Ring finger domain 189 232 IPR001841 -
Prci5g2214 235 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 151 235 IPR013083 -
Prci5g2214 235 SUPERFAMILY RING/U-box 172 235 - -
Prci5g2214 235 ProSiteProfiles Zinc finger RING-type profile. 190 232 IPR001841 -
Prci5g2214 235 SMART ring_2 190 231 IPR001841 -
Prci5g2214 235 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 22 234 IPR044523 -
Prci5g2214 235 FunFam NEP1-interacting protein-like 1 150 235 - -
Prci5g2214 235 CDD RING-H2_NIPL1-like 189 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g2214 Prci-Chr5 39312459 39315333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g2214 20 235 C3H Transcription Factor Family AT5G66070 74.074 3.77e-113 322