Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g2202 ATGGTGATCGAGGAGGACGTGGAGAGCTGCGCGAGTCGAGCCGTGCAGTCACAGCAAGCTCATCCTCGTCATCACAGCCAGAAATTGGAAGTGTACAATGAGGTGCTCCGTCGAATTCGAGAGTTCAATTATGAGGAGGCCAATATTCCAGATTTTGATGATCAACTATGGCTTCATTTCAATCGTCTTCCTGCTAGGTACGCATTTGATGTGAATGTGGAGAGGGCAGAAGATGTTCTTGCTCATATGAAACTACTGAAGTTAGCAGAGGACCCGGCTAATCGACCCGCATTTCAAGTTCGCTTAGTACAGGTACAAAGCTTTGGGAGTGCAAATAACGCTGACTCTATGCACTCAGATCCATCTGAGAATGAAGATGCGCAGAGCTCTTATAACTATTCTTTTAAGCAGGGAATTCACCTGCCACCTACTTTCGGTTCATCATCAAATCTTGAAGCTCTTTCACGTAAAGCAATTAAAAATAATATTGAAGATGGGAACAGTGCTATGGATGTGATACCGCATTCTTTCCGGCCCATGCATGAGATTACTTTTTCAACTGTTGACAAGCCTAAACTCCTTAGTCAGTTAACTGCATTACTCAGCGAGATTGGATTGAACATTCAAGAAGCCCATGCATTTTCCACCAATGATGGCTTCTCTCTTGATGTCTTTGTCGTTGAGGGTTGGCCTAATGAGGATACTGAGGAGCTCAGAGCTATATTGGAAAAGGAAATTTTTAAATTTAAGGAGCAATATCTGTCAAAACAGGGAACACATTATGCTGCCAAGGACGATCATCAGGAAAGGATGGAACCCTTTCCTCCTTGCATAGAAATACCGTCTGATGGAACTGATGTCTGGGAAATTAATACCAACCTGTTGAAATTTGAAAACAAAGTTGGCTCTGGATCATTTGGTGACTTGTACAAAGGCACATATTGCAGTCAAATTGTGGCTATCAAGGTCCTCAAACCTGAGCGCACAAATACAGATATGTTGAGAGAGTTCGCACAGGAAGTTTATATCATGAGGAAGATTCGACACCGGAATGTTGTCCAATTCATTGGAGCATGTACTAGACCACCAAATCTGTGTATTGTTACTGAGTTTATGTCTAGGGGAAGCCTATATGACTTTCTGCACAAACAGAGAGGTGTATTTAAGCTTCCAACTTTGCTAAAAGTGGCAATTGATGTTTCCAAGGGAATGAACTATTTGCACCAAAATAATATCCTCCACAGGGACCTCAAGACTGCCAATCTGCTTATGGATGAAAATGAAGTAGTGAAGGTTGCTGATTTTGGGGTTGCCAGAGTGAAGATGCAATCCGGAGTGATGACAGCTGAAACTGGAACGTACCGTTGGATGGCTCCGGAGGTCATCGAGCACAAACCGTATGACCAAAAAGCAGATGTCTTTAGTTTTGCAATAACTCTTTGGGAGCTTCTAACCGGAGAACTGCCTTACTCTTACTTGACTCCATTACAAGCAGCAGTAGGCGTGGTGCAAAAGGATCTAAGACCTACAATCCACAAGAGCACGCACCCAAGAATTTCTGAACTTCTCCAACGTTGCTGGCAACAAGATCCAAAAGATAGACCAGAATTCTCCGAGATAATAGAGATTCTTCAGCTGATAGCTAAAGAGGTTATTGATGAAAAAGGCGATCGGCACAAAGATAAATCGTCCCATGGCTTTCTCTCAGCACTTAGATGGGGCCATCACTGA 1731 0.4315 MVIEEDVESCASRAVQSQQAHPRHHSQKLEVYNEVLRRIREFNYEEANIPDFDDQLWLHFNRLPARYAFDVNVERAEDVLAHMKLLKLAEDPANRPAFQVRLVQVQSFGSANNADSMHSDPSENEDAQSSYNYSFKQGIHLPPTFGSSSNLEALSRKAIKNNIEDGNSAMDVIPHSFRPMHEITFSTVDKPKLLSQLTALLSEIGLNIQEAHAFSTNDGFSLDVFVVEGWPNEDTEELRAILEKEIFKFKEQYLSKQGTHYAAKDDHQERMEPFPPCIEIPSDGTDVWEINTNLLKFENKVGSGSFGDLYKGTYCSQIVAIKVLKPERTNTDMLREFAQEVYIMRKIRHRNVVQFIGACTRPPNLCIVTEFMSRGSLYDFLHKQRGVFKLPTLLKVAIDVSKGMNYLHQNNILHRDLKTANLLMDENEVVKVADFGVARVKMQSGVMTAETGTYRWMAPEVIEHKPYDQKADVFSFAITLWELLTGELPYSYLTPLQAAVGVVQKDLRPTIHKSTHPRISELLQRCWQQDPKDRPEFSEIIEILQLIAKEVIDEKGDRHKDKSSHGFLSALRWGHH 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g2202 576 SMART serkin_6 295 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g2202 576 ProSitePatterns Protein kinases ATP-binding region signature. 301 322 IPR017441 GO:0005524
Prci5g2202 576 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 112 548 - -
Prci5g2202 576 FunFam Serine/threonine-protein kinase isoform 1 285 373 - -
Prci5g2202 576 PRINTS Tyrosine kinase catalytic domain signature 452 462 IPR001245 GO:0004672|GO:0006468
Prci5g2202 576 PRINTS Tyrosine kinase catalytic domain signature 471 493 IPR001245 GO:0004672|GO:0006468
Prci5g2202 576 PRINTS Tyrosine kinase catalytic domain signature 406 424 IPR001245 GO:0004672|GO:0006468
Prci5g2202 576 PRINTS Tyrosine kinase catalytic domain signature 515 537 IPR001245 GO:0004672|GO:0006468
Prci5g2202 576 PRINTS Tyrosine kinase catalytic domain signature 369 382 IPR001245 GO:0004672|GO:0006468
Prci5g2202 576 ProSiteProfiles ACT domain profile. 182 257 IPR002912 -
Prci5g2202 576 SUPERFAMILY Protein kinase-like (PK-like) 275 544 IPR011009 -
Prci5g2202 576 ProSiteProfiles Protein kinase domain profile. 295 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g2202 576 Pfam Protein tyrosine and serine/threonine kinase 295 544 IPR001245 GO:0004672|GO:0006468
Prci5g2202 576 CDD ACT_TyrKc 180 246 - -
Prci5g2202 576 Gene3D - 181 252 - -
Prci5g2202 576 SUPERFAMILY ACT-like 180 249 IPR045865 -
Prci5g2202 576 Gene3D Phosphorylase Kinase; domain 1 284 373 - -
Prci5g2202 576 Coils Coil 232 252 - -
Prci5g2202 576 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
Prci5g2202 576 Gene3D Transferase(Phosphotransferase) domain 1 374 567 - -
Prci5g2202 576 CDD STKc_MAP3K-like 301 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g2202 Prci-Chr5 39197013 39211289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g2202 2 575 MAP Kinase Kinase Kinase AT4G35780 68.631 0.0 799
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Prci5g2202 PK_Tyr_Ser-Thr 2e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g2202 - - gmx:100816767 969.533