Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g2175 ATGGTGATTTCTCATGAGAACAATGCTGATGCCATCAAACCCCCAAGCTTGCAAGGAGGTGTGGTCGTGGAGAATAGGAGGGCATTGAGCGTCATCAATCAGAACCATTGCGTAGTTAACAAGAATGAATTCACAATACAACGGGAGATTGTTGAAAAGAAGATCGGCGATCCAGTGCATCGACCAATTACGAGGACATTTGCTGCACAAATTGCTCCCACAAAGCAGCCTCTTGTTGAGGAAAACAAGAAGTTGAATGGATCAAGTTTAAACTCAAATGGATTTGGAGAATGTATTTTTGTGGATGAAGTACATAAGTCAGTGAAGGACCATCCAGTGGCCATGTCTGTAGAACAATCTGAAGAAGTAATGCAGACAGAAACGGATCAGATGAAGGAAGTTGAGATGGAGGATATAATTGAAGATCCTATCATCGACATTGATAGTAGTGATGTGAACAACCATCTTGCAGTTGTGGAGTACATTCAAGAACTTTATTCTTACTACAGAAAAATGGAGAGTACTAGCTGCGTCTCACCAAATTATATGCTACAACAATTTGACATTAATGAAAGGATGAGAGCTATACTAATTGACTGGCTCATTGAGGTGCAAGACAAGTTTGATCTCATGCATGAGACTTTGTTCCTTACAGTGAACCTGATAGATAGGTTTTTGGAAAAGCAATCAGTGGTAAGGAATAGGCTTCAGTTAGTGGGTTTGGTGGCCATGCTTTTGGCATGCAAGTATGAGGAAGTTTCAGTTCCTGTAGTGGAGGATCTTATACTTATATCAGACAAAGCATATACAAGGAAAGAAGTTCTAGAAATGGAGAAGTTGATGCTTAACACTTTGCAATTTAACATGACAGTGCCCACACCGTATGTGTTCATGAGAAGGTTTCTAAAGGCTGCTCAAGCAGATAGAAAAATGGAGTTGCTTGCTTTCTTCTTGATAGAGCTATCTTTAGTGGAGTATGGCATGTTGAACTTCCCGCCATCTTTGCTAGCTGCAGCTGCAGTTTTTACAGCTCAATGCTGCATATGTGGTTTCAAGCAATGGAGCAAGACATGCGAATGGCACACGAACTACTCAGAAGATCAACTACTGGAATGCTCTAAATTGATGGTTGATTTGCACCAAAAGGCTGAAAAGGGAAAACTTACTGCTGTACATAGGAAGTATTGCACGTCTAAATTCAACTATTCTTCAAAATGTGAACCAGCGAGCTTCCTTGTGGTGAACCAATTGTAG 1254 0.4067 MVISHENNADAIKPPSLQGGVVVENRRALSVINQNHCVVNKNEFTIQREIVEKKIGDPVHRPITRTFAAQIAPTKQPLVEENKKLNGSSLNSNGFGECIFVDEVHKSVKDHPVAMSVEQSEEVMQTETDQMKEVEMEDIIEDPIIDIDSSDVNNHLAVVEYIQELYSYYRKMESTSCVSPNYMLQQFDINERMRAILIDWLIEVQDKFDLMHETLFLTVNLIDRFLEKQSVVRNRLQLVGLVAMLLACKYEEVSVPVVEDLILISDKAYTRKEVLEMEKLMLNTLQFNMTVPTPYVFMRRFLKAAQADRKMELLAFFLIELSLVEYGMLNFPPSLLAAAAVFTAQCCICGFKQWSKTCEWHTNYSEDQLLECSKLMVDLHQKAEKGKLTAVHRKYCTSKFNYSSKCEPASFLVVNQL 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g2175 417 PANTHER CYCLINS 127 389 IPR039361 -
Prci5g2175 417 SUPERFAMILY Cyclin-like 153 289 IPR036915 -
Prci5g2175 417 ProSitePatterns Cyclins signature. 194 225 IPR006671 -
Prci5g2175 417 Coils Coil 117 137 - -
Prci5g2175 417 Pfam Cyclin, N-terminal domain 165 289 IPR006671 -
Prci5g2175 417 PIRSF Cyclin_A_B_D_E 3 417 IPR046965 GO:0016538|GO:0044772
Prci5g2175 417 FunFam G2/mitotic-specific cyclin-1 274 404 - -
Prci5g2175 417 SMART Cyclin_C_2 292 409 IPR004367 -
Prci5g2175 417 SMART cyclin_7 199 283 IPR013763 -
Prci5g2175 417 SMART cyclin_7 296 378 IPR013763 -
Prci5g2175 417 Gene3D - 165 404 - -
Prci5g2175 417 SUPERFAMILY Cyclin-like 291 409 IPR036915 -
Prci5g2175 417 CDD CYCLIN_AtCycB-like_rpt2 292 408 - -
Prci5g2175 417 Gene3D - 178 290 - -
Prci5g2175 417 CDD CYCLIN_AtCycB-like_rpt1 149 287 - -
Prci5g2175 417 Pfam Cyclin, C-terminal domain 292 408 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g2175 Prci-Chr5 39069470 39074642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g2175 1 413 Core Cell Cycle Gene Families AT1G20610 55.116 5.70e-160 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g2175 K21777 - gmx:100798068 572.778