Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g2148 ATGAAAAGTGGCGGCAGCAATGATGGAGGTGCATTCATGGAGGATCCTAATGGAGGCACTAATTTAAATCAGTCTTGTAGTGGCAAGCCTCCTAGAGACGCTTCCGCCATGCGTCATTGCGCTAGTTCTACCTTCCTTGCCGATTCGGAAGCAGATATTGTGAGTGTAGAATTGAAAACAGCGGCCACGACGACGGAGGAGAAATCGGAGTTTTGGCCTATATTTCGATCTGGAAGCTGTTCTGAAAAAGGACCGAAGCAGTACATGGAGGATGAATTCATCGCTGTCGATGATCTCCATGAACATGTTCCTCCAGGAAGTCGCCTTCCTTCTCCTGGAGCTTTTTATGGGATATTTGATGGGCACGGAGGCACGGATGCAGCATTGTTTACGAGAAAGAACATCCTCAAGTTTATCACTGCGGACTCAAACTTCCCTTGCAGCATCAGAAAGGCTATCAAGAGTTCATTTGTGAAGGTGGATCACGCATTAGCAGATGCCATTTCTCTTGATATGTCTTCAGGCACCACTGCTTTGATAGCCCTCATGATGGGAAGAAGTATGATGATAGCTAATATAGGCGATTCTCGAGCTGTGTTGGGAAAACGAGGCAGAGCCATTGAACTATCAAAAGATCACAAGCCAAACTGCACATCGGAGAGATTAAGAATCGAGAAACTGGGCGGAGTGATCTACGACGGATACCTGAACGGCCAGCTGTCGGTGGCAAGGGCTCTAGGAGACTGGCACATCAAGGGGTCAAAAGGATCGAAGAGCCCACTAATCTCAGAACCAGAGATCGAAGAGGTGGAGTTAACGCAAGACGACGAGTACTTAATAATGGGGTGTGATGGGTTGTGGGACGTGATGAGCAGCCAGTGTGCGGTGACGACAGTGAGGAAAGAGCTGATGAAACACAACGATCCTGCGAGGTGTGCGAAAGCGCTCGTCATAGAAGCGCTCCAACGTAATACATGCGACAATCTAACTGTTGTCGTTGTCTGTTTCTCCCAGCATCCTCCTCCCAAGCTGCAAGTTCCTGTGTTGCACAAGAGGAGGAGCATCTCAGCTGAAGGCTTGGACCTTCTCAAGGGCGTCCTCTCTTGA 1107 0.4887 MKSGGSNDGGAFMEDPNGGTNLNQSCSGKPPRDASAMRHCASSTFLADSEADIVSVELKTAATTTEEKSEFWPIFRSGSCSEKGPKQYMEDEFIAVDDLHEHVPPGSRLPSPGAFYGIFDGHGGTDAALFTRKNILKFITADSNFPCSIRKAIKSSFVKVDHALADAISLDMSSGTTALIALMMGRSMMIANIGDSRAVLGKRGRAIELSKDHKPNCTSERLRIEKLGGVIYDGYLNGQLSVARALGDWHIKGSKGSKSPLISEPEIEEVELTQDDEYLIMGCDGLWDVMSSQCAVTTVRKELMKHNDPARCAKALVIEALQRNTCDNLTVVVVCFSQHPPPKLQVPVLHKRRSISAEGLDLLKGVLS 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g2148 368 SMART PP2C_SIG_2 94 336 IPR001932 -
Prci5g2148 368 SUPERFAMILY PP2C-like 64 338 IPR036457 -
Prci5g2148 368 PANTHER PROTEIN PHOSPHATASE 2C 65 334 IPR015655 GO:0004722|GO:0006470
Prci5g2148 368 Pfam Protein phosphatase 2C 77 328 IPR001932 -
Prci5g2148 368 Gene3D - 54 340 IPR036457 -
Prci5g2148 368 ProSiteProfiles PPM-type phosphatase domain profile. 76 336 IPR001932 -
Prci5g2148 368 ProSitePatterns PPM-type phosphatase domain signature. 115 123 IPR000222 GO:0043169
Prci5g2148 368 SMART PP2C_4 66 334 IPR001932 -
Prci5g2148 368 CDD PP2Cc 75 336 IPR001932 -
Prci5g2148 368 MobiDBLite consensus disorder prediction 1 35 - -
Prci5g2148 368 FunFam Probable protein phosphatase 2C 22 60 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g2148 Prci-Chr5 38850795 38853282 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g2148 69 368 PP2C-type Phosphatase Gene Family AT3G51470 76.000 9.48e-170 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g2148 K14803 - cave:132171122 535.028