LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci5g2145	ATGGAAGATGAAGAAAGTGGTGGGAATTCCATAGCAACCTCTTCCCCGAGTCCATTAATAAACTGGTGGGATCTTCATGCAACTTCATCGCTTTCATCCTGGAGCGATCATCATCATCATCATCATCCTGCTGCTGCTGCTGCAAACCCTGATTCTAATTCCTCCTCGTGCTGTGAAGATCAAGACGTATCATCCCTCGCCGTCGAATCCCCTCATCGCCGCCTCATCCACCTCTCCGCGCCTTCCTCCAATTCCTTCATCCCTTCACAGCCACAAGATCATCCCCTTTGGACTCACGTCTTATTGGGTGTTGGTAGCAACGAGGAGGCACAAAATAGCCAAGTTGGAGAGAACTTTATGGACGCACTGTCGTCTAAAAGCATGATGAACGAGCCAGCGAGCAATTACTTGAAGAAACTCGATACGACATGGGAATACAACAACCACCACAACAATAATTCTTCATGTTTGATCAACAGTTCGAGTTTTGATAATCAGAAACAATTGAATGGGTTCAACGAGGCTGTGCTTGAGAGTGAAAGATTGAGCAAGCTGGTCAGCACTTGGTCTATTGCACCACCAGACCCACAACTTGATACTCACCATCAAACACACGGCAACAACAATTATAATAACAACATTAATACTGTGATTTTGAATTCTTCCATGGATCATTCTGGGGGTTTTTCTTCATACGGTGGTCATGACATGAATGTTAAGCAAGAACATCACCACCACCATCATCATCCGAGTGAAGCACCATCAGCACAAGGTTTGTTCGGATATCAAAATAATGGATTATTTAACAGTCATGAATCGTACGGGATGCCCAGTTTGTCTTCGTGTTCAAGAAATTTGTCAGATGTTATATCTTTCACTGGAAGGATAGGTCTGCCGGTCATCGGAATTCATGCACTGAAACCCAGTTTCCGCCCTCCGTTGATGAGCGTATCTGACTCCAAGAAGCAGGCTTTCCAGACATCATTGCCGACAAGGACAGGCAATGGAAGAGGACAAGGGAGCGCCACTCAAGTAAAGAAGAAAAGAACAGATGACTCATCAGAAGCAATCTTGAAGAAGCCAAAGCAAGAAACTTCCACAGCATCTTCTACAAAGGTGCAAGCACCGAAAGTCAAGCTAGGCGACAAGATTACAACCCTTCAGCAAATTGTGTCGCCATTTGGAAAGGTCACTACATATTGCACTAACACCATTTTATTCTTTTTCTCTTTTTTCTTTTTTATATTATTTTTACAAGAACAAGTCCAGCTACTGAGCAACTCTTACATGAAGACCAACCCAAACAAGGAAACATGGGGAAGCATGGAGAGAAAAGATGAAATAGAGATGAAGGGAGAGCTGAGGAGCAGAGGGCTTTGTTTAGTTCCAATTTCATGGACTCCTCAGGCTTACAGAGACAACACTGCCCCTGACTACTGGACTCCTGCTTACAGAGGTTGCTTCTTTCGGTAG	1473	0.4426	MEDEESGGNSIATSSPSPLINWWDLHATSSLSSWSDHHHHHHPAAAAANPDSNSSSCCEDQDVSSLAVESPHRRLIHLSAPSSNSFIPSQPQDHPLWTHVLLGVGSNEEAQNSQVGENFMDALSSKSMMNEPASNYLKKLDTTWEYNNHHNNNSSCLINSSSFDNQKQLNGFNEAVLESERLSKLVSTWSIAPPDPQLDTHHQTHGNNNYNNNINTVILNSSMDHSGGFSSYGGHDMNVKQEHHHHHHHPSEAPSAQGLFGYQNNGLFNSHESYGMPSLSSCSRNLSDVISFTGRIGLPVIGIHALKPSFRPPLMSVSDSKKQAFQTSLPTRTGNGRGQGSATQVKKKRTDDSSEAILKKPKQETSTASSTKVQAPKVKLGDKITTLQQIVSPFGKVTTYCTNTILFFFSFFFFILFLQEQVQLLSNSYMKTNPNKETWGSMERKDEIEMKGELRSRGLCLVPISWTPQAYRDNTAPDYWTPAYRGCFFR	490

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci5g2145	490	MobiDBLite	consensus disorder prediction	321	343	-	-
	Prci5g2145	490	MobiDBLite	consensus disorder prediction	33	59	-	-
	Prci5g2145	490	MobiDBLite	consensus disorder prediction	321	373	-	-
	Prci5g2145	490	MobiDBLite	consensus disorder prediction	229	259	-	-
	Prci5g2145	490	MobiDBLite	consensus disorder prediction	344	359	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci5g2145	Prci-Chr5	38797408	38800698	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci5g2145	27	490	Basic Helix-Loop-Helix Transcription Factor Gene Family	AT1G31050	29.697	5.46e-35	133

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci5g2145	-		-	pcin:129311824	894.804