Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g2131 ATGGCACAGACTGCACCAAACCCCCTTTTGAGTGTGAAGGAGATGCAAGGGAGAGGAAGGGGGATGGTTGCATCTCAGCCTCTTAAAGCTGGTCAAGTTGTTCTCAGAGATTCTCCTATCCTGCTGTATTCTGCTTTGCCTTTGATCCCACAGTCATCAACCATCTCCTCTTCCCCAGCCTTCTGTGACCACTGTTTCAGAACCCTACCAAGGCCATCTTCAATGGAAGGTCCTTCATCATCCTTGGTTTTGTGCCCTTCTTGTTGTCACCATCGTTTTTGTAGCCCAAAATGTCTATCAATTGCCCAAAATACATCACACACTTCTTGGGTATGTCAAGCATTATCTCATCTTCGAGTCAATTCTGTACTGCTTGAACAGCCCCTTGAGTGTCAAGTCCAGGTGCATTTTCTCATTGCTGCCTACAATCTGGCCAGTGTCTCCCTGTCAGGCTTTCAAACTCTGCTTGCTCTTCATGGTTCTCCTGATGATACTACGATTGCTTCAGCTCAGTTCCTACACACCCTTATTTCATCCCTCTTTCCGTTTGCTCCAACAAGTCATCAGAATTGGTTTTCCTTGGAACTCACTGCTGCCCTGTTGGCCAAGGATAAGCTCAATGCGTTTGGCTTGATGCAACCATTCTCTGAAGATAATGACCAGAGATCAGTTAGAGCGTATGGCATCTACCCTTATGCCTCCTTCTTTAACCATGATTGCCTTCCTAATGCCTGCAGATTTGATTATGTGGATACTAGTGCAGCAGATGATAACCATAACATCGACATTATCATTAGAATGATTCATGATGTTCCTGAAGGTAGGGAAATCTGTTTGAGCTATTTCCCTGTGAATGAAAATTATTCTAGTCGGCAGAAGAGATTGATGGAAGACTACGGCTTCACCTGTAAGTGTGATCGATGTAATATTGAAGCAAATTGGTCAGATAACGACATTGTTGAGGATGATACAGAGGATATTGAAGAGGCAATGGATGAGGACCAATGTGAAGATATGGCAGCTTCTGACACTGAAAGTAATCCCCAAGCAGATAACAATGATTTCCCTCATGCATATTTCTTCTTGAAATTCATGTGTGATAGAAAGAATTGCTGGGGTACTTTAGCTCCTTTACCCCCACAGGGTGATACTCCATCCAATGTTATGGAATGTAATGTCTGTGGCAACTTGAAGAGGGACAATGTCCTTGATGGTGATGGAGGAGAAGATGGAGTTTCCATGGAGGACTGA 1251 0.4396 MAQTAPNPLLSVKEMQGRGRGMVASQPLKAGQVVLRDSPILLYSALPLIPQSSTISSSPAFCDHCFRTLPRPSSMEGPSSSLVLCPSCCHHRFCSPKCLSIAQNTSHTSWVCQALSHLRVNSVLLEQPLECQVQVHFLIAAYNLASVSLSGFQTLLALHGSPDDTTIASAQFLHTLISSLFPFAPTSHQNWFSLELTAALLAKDKLNAFGLMQPFSEDNDQRSVRAYGIYPYASFFNHDCLPNACRFDYVDTSAADDNHNIDIIIRMIHDVPEGREICLSYFPVNENYSSRQKRLMEDYGFTCKCDRCNIEANWSDNDIVEDDTEDIEEAMDEDQCEDMAASDTESNPQADNNDFPHAYFFLKFMCDRKNCWGTLAPLPPQGDTPSNVMECNVCGNLKRDNVLDGDGGEDGVSMED 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g2131 416 Gene3D SET domain 21 308 IPR046341 -
Prci5g2131 416 ProSiteProfiles SET domain profile. 1 282 IPR001214 GO:0005515
Prci5g2131 416 CDD SET_SMYD 206 308 - -
Prci5g2131 416 MobiDBLite consensus disorder prediction 331 351 - -
Prci5g2131 416 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 1 404 IPR044238 -
Prci5g2131 416 Gene3D - 61 121 - -
Prci5g2131 416 SMART set_7 8 288 IPR001214 GO:0005515
Prci5g2131 416 Pfam SET domain 19 281 IPR001214 GO:0005515
Prci5g2131 416 Gene3D - 126 208 - -
Prci5g2131 416 SUPERFAMILY SET domain 7 304 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g2131 Prci-Chr5 38717533 38720268 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci5g2131 SET 1.8e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g2131 - - gmx:100783406 637.876