Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g2123 ATGGTGTCAGAAGCGAGTACGTGCGAGTCGCAGAGCCATCGCTTCAAGGGGACGTGTGTGAGCAAATCTAACTGCGCCTCCGTTTGCCAGACCGAAGGCTTTCCCGACGGTCACTGCCGCGGCTTCCGTCTCCGATGCTTCTGCAGCAGACCGTGTTAA 159 0.5849 MVSEASTCESQSHRFKGTCVSKSNCASVCQTEGFPDGHCRGFRLRCFCSRPC 52
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g2123 52 PANTHER DEFENSIN-LIKE PROTEIN 1 4 49 - -
Prci5g2123 52 PRINTS Purothionin signature 7 22 IPR008176 GO:0006952
Prci5g2123 52 PRINTS Purothionin signature 37 51 IPR008176 GO:0006952
Prci5g2123 52 SUPERFAMILY Scorpion toxin-like 7 52 IPR036574 -
Prci5g2123 52 SMART gth_4 7 52 IPR003614 GO:0006952
Prci5g2123 52 CDD Knot1 17 48 IPR003614 GO:0006952
Prci5g2123 52 ProSitePatterns Gamma-thionins family signature. 6 29 IPR008176 GO:0006952
Prci5g2123 52 Pfam Gamma-thionin family 7 52 - -
Prci5g2123 52 Gene3D - 6 52 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g2123 Prci-Chr5 38692003 38692520 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g2123 4 52 Plant Defensins Gene Families AT2G02100 77.551 1.38e-22 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g2123 - - pcin:129312204 119.398