Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g2122 ATGTGGCTCCGCCACTGCACCCGGCCATCGCGACTCCGCTATTTAAGACCACTGGCACCGCCCTGCTTCATCAGTCTTCGTCTTTTTCATACCCTTGATTGCTCACCTTGTTCGTATTCTCAGATATACATGGCGAGGTCTGGGCGTCTGGTTTCCACCATTTTCGTCCTCCTTCTCCTTCTCGTGGCCACTGAGATGGGGCCGACAATGGTGGCAGAAGCAAGGACTTGCGAGTCCCAGAGCCACCGCTTCCAGGGGACGTGTGTGAGCAAATCTAACTGCGCCAACGTTTGCCGGACCGAGGGATTCCCCGGATGGCACTGCCGTGGCTTCCGTCGCCGCTGCTTCTGCATCAAGCCCTGTTAA 366 0.571 MWLRHCTRPSRLRYLRPLAPPCFISLRLFHTLDCSPCSYSQIYMARSGRLVSTIFVLLLLLVATEMGPTMVAEARTCESQSHRFQGTCVSKSNCANVCRTEGFPGWHCRGFRRRCFCIKPC 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g2122 121 PANTHER DEFENSIN-LIKE PROTEIN 1 51 118 - -
Prci5g2122 121 Gene3D - 75 121 IPR036574 -
Prci5g2122 121 Pfam Gamma-thionin family 75 121 - -
Prci5g2122 121 ProSitePatterns Gamma-thionins family signature. 75 98 IPR008176 GO:0006952
Prci5g2122 121 PRINTS Purothionin signature 76 91 IPR008176 GO:0006952
Prci5g2122 121 PRINTS Purothionin signature 106 120 IPR008176 GO:0006952
Prci5g2122 121 SUPERFAMILY Scorpion toxin-like 75 121 IPR036574 -
Prci5g2122 121 CDD Knot1 86 118 IPR003614 GO:0006952
Prci5g2122 121 SMART gth_4 76 121 IPR003614 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g2122 Prci-Chr5 38680554 38681255 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g2122 44 121 Plant Defensins Gene Families AT2G02100 65.385 2.20e-32 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g2122 - - qsa:O6P43_026022 126.716