Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g2121 ATGGCGAGGTCTGGGCGTCTGGTTTCCACCATTTTCGTCCTCCTCCTCCTTCTCGTCGCCACTGAGATGGGGCCGACAATGGTGGCAGAAGCAAGGACGTGCGAGTCCCAGAGCCACCGCTTCAAGGGGACGTGTGTGAGCAAATCTAACTGCGCCAACGTTTGCCGGACCGAGGGATTCCCCGGAGGGCACTGCCGTGGCTTCCGTCGCCGCTGCTTCTGCACCAGGCCCTGTTAA 237 0.616 MARSGRLVSTIFVLLLLLVATEMGPTMVAEARTCESQSHRFKGTCVSKSNCANVCRTEGFPGGHCRGFRRRCFCTRPC 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g2121 78 ProSitePatterns Gamma-thionins family signature. 32 55 IPR008176 GO:0006952
Prci5g2121 78 PANTHER DEFENSIN-LIKE PROTEIN 1 8 75 - -
Prci5g2121 78 PRINTS Purothionin signature 63 77 IPR008176 GO:0006952
Prci5g2121 78 PRINTS Purothionin signature 33 48 IPR008176 GO:0006952
Prci5g2121 78 FunFam Defensin-like protein CAL1 32 78 - -
Prci5g2121 78 SUPERFAMILY Scorpion toxin-like 32 78 IPR036574 -
Prci5g2121 78 Gene3D - 32 78 IPR036574 -
Prci5g2121 78 CDD Knot1 43 75 IPR003614 GO:0006952
Prci5g2121 78 SMART gth_4 33 78 IPR003614 GO:0006952
Prci5g2121 78 Pfam Gamma-thionin family 32 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g2121 Prci-Chr5 38676561 38677235 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g2121 1 78 Plant Defensins Gene Families AT2G02100 70.513 2.75e-35 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g2121 - - gsj:114420878 88.9669