Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Prci5g2098 | ATGTCTGCTTCTGGATATGCAAGAACAAGAGGGAGCAGTGCCTTCTTCTATCTATTTCTCGCAGTTTCTGTTGCACAGATTACCATGTGCTTCTCTGCAAAGGTTTATGTAGTCTACATGGGAAGCAAAAATGGCGAAGACCCAGCCGAAATTATAAGGCACCACCACCAAATTCTTGCTTCTGTTCACAGTGGAAGGGGATTTGCAGCGAAGCTGACTGATGAGCAGGCTTCTCAGATTTCAAAAATGCCTGGAGTGGTTTCTGTGTTTCCCAATTCTAAAAGAAGGCTACATACAACTCATTCGTGGGACTTTATGGGTCTTCTGGACGATGAAACGATGGAGATTCTTGGGTTCTCCACCAGAAACCAAGCAAACATCATCGTTGGTTTCATTGACACTGGAATTTGGCCTGAATCTCCAAGTTTTAGCGATGTCGACATGCCGCCGGTGCCACCAGGATGGAAAGGAAAATGTGAATCAGGAGAAGCATTCAATGCTTCTTCTTGCAACAGGAAAGTCATTGGAGCTAGATACTACATGCGTGGGTATGAAGTAGAAGAAGGATCAGACTCAGACATAAAAGTCTCTTTCAGATCCCCAAGAGATAGCTCCGGCCATGGCAGCCACACAGCTTCAATAGCCACAGGGCGGTACGTGCCCAACATGAACTATATGGGATTGGCAGGTGGAGGAGCCAGGGGAGGAGCACCAATGGCTAGGATTGCTGTGTACAAAACTTGTTGGGACTCAGGCTGCTATGATGTAGATTTGCTGGCTGCTTTTGATGATGCTATTAGAGATGGGGTTCACATTTTGTCTGTGTCTCTGGGTCCTGAGTCTCCTCAAGCAGACTACTTTAATGATGCTATATCAGTGGGGTCGTATCAAGCAGCCAATCGTGGGGTGCTGGTGGTTGCATCGGCTGGGAACGAAGGGTATCCTGGTTCTGTTACCAACCTTGCACCATGGATGATCACTGTTGCTGCTAGCTCCACTGATAGGGATTTCACCTCTGATGTCACATTGGGAAATAGTGTCAATATCACGGGTGAAAGTCTGAGTCTCTCTGAAATGAGTGCCTTTGCAAGGATAATTTCTGCTTCTGAAGCTTCTGCAGGATATTTCACTCCTTATCAATCCAGCTACTGCATAGAAAGTTCCCTCAATAAGACCAAGACCCAAGGGAAAGTTCTGGTGTGCCGACATGCAGAGAGTTCAATAGAGTCAAAGGTAGTGAAAAGTACTTTAGTGAAAGAAGCAGGCGGAGTTGGAATGATACTTATAGATGAAACAGGTCAAGATATTGCCCTCCCGTTTGTGATACCTTCAGTCATTATTGGAAGGAGAACAGGCCGCCATATTCTCTCGTACATCAACAATACACGTAAGGCAATGGCAAGGATTTCCAGAGCAAAGACAGTATTAGGAGCAAAGCCTGCACCACGTGTGGCAGCATTTTCTTCCAAAGGCCCCAACAGCTTAACCCCAGAAATTCTGAAGCCTGATGTCACAGCCCCAGGATTGAACATCCTTGCAGCTTGGTCTCCAGCAGCCAAAAACATGATGTTCAACATTCTCTCAGGAACTTCCATGGCTTGTCCTCATATAACTGGAATTGCAACCTTAATCAAAGCTGTTCATCCTTCATGGTCTCCATCTGCTATCAAGTCTGCCATCATGACAACTGCTACAATTCTGGATAAGCACCATGGACTCATCAGGGCCGATCCTGAACAAAGAAGTGCCAATGCATTTGATTATGGATCAGGCTTTGTGAACCCTGCAAGAGTTCTTGACCCCGGTCTCATCTATGATATAGAAGCAGAAGATTATCTAGCATTCCTCTGTTCACTTGGGTACAATGAGAGGTCACTCCATCTTGTTACTAGAAACAACAGAACATGTGATAGGGCATTCAAATCTGCATCCGAGCTCAACTACCCATCCATCACAGTGCCAAACCTCAAAGACAATTTCTCAGTGACTAGAACTGTGACTAATGTTGGAAAAGCGATAAGTATTTACAAAGCCGCAGTGTCTCCTCCTGCAGGAGTTAATGTCACCGTGGTGCCAAACAGGTTAATCTTCACAAGGATTGGGCAGAAAATCAACTTCACTGTGAATTTCAAAGTTGCTTCTCCCTCAAAGGGCTATACATTTGGTTTCCTGTTATGGAGGAATGAAAGATTGCATGTCTACAGTCCTTTAGTTGTCAGGGTTTCACCTGGAAAACTTGGGTTGGTCAGATAA | 2253 | 0.4527 | MSASGYARTRGSSAFFYLFLAVSVAQITMCFSAKVYVVYMGSKNGEDPAEIIRHHHQILASVHSGRGFAAKLTDEQASQISKMPGVVSVFPNSKRRLHTTHSWDFMGLLDDETMEILGFSTRNQANIIVGFIDTGIWPESPSFSDVDMPPVPPGWKGKCESGEAFNASSCNRKVIGARYYMRGYEVEEGSDSDIKVSFRSPRDSSGHGSHTASIATGRYVPNMNYMGLAGGGARGGAPMARIAVYKTCWDSGCYDVDLLAAFDDAIRDGVHILSVSLGPESPQADYFNDAISVGSYQAANRGVLVVASAGNEGYPGSVTNLAPWMITVAASSTDRDFTSDVTLGNSVNITGESLSLSEMSAFARIISASEASAGYFTPYQSSYCIESSLNKTKTQGKVLVCRHAESSIESKVVKSTLVKEAGGVGMILIDETGQDIALPFVIPSVIIGRRTGRHILSYINNTRKAMARISRAKTVLGAKPAPRVAAFSSKGPNSLTPEILKPDVTAPGLNILAAWSPAAKNMMFNILSGTSMACPHITGIATLIKAVHPSWSPSAIKSAIMTTATILDKHHGLIRADPEQRSANAFDYGSGFVNPARVLDPGLIYDIEAEDYLAFLCSLGYNERSLHLVTRNNRTCDRAFKSASELNYPSITVPNLKDNFSVTRTVTNVGKAISIYKAAVSPPAGVNVTVVPNRLIFTRIGQKINFTVNFKVASPSKGYTFGFLLWRNERLHVYSPLVVRVSPGKLGLVR | 750 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Prci5g2098 | 750 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 529 | 539 | IPR023828 | - | |
| Prci5g2098 | 750 | FunFam | Subtilisin-like protease SBT1.5 | 616 | 742 | - | - | |
| Prci5g2098 | 750 | Pfam | Peptidase inhibitor I9 | 53 | 98 | IPR010259 | - | |
| Prci5g2098 | 750 | PRINTS | Subtilisin serine protease family (S8) signature | 124 | 143 | IPR015500 | - | |
| Prci5g2098 | 750 | PRINTS | Subtilisin serine protease family (S8) signature | 528 | 544 | IPR015500 | - | |
| Prci5g2098 | 750 | PRINTS | Subtilisin serine protease family (S8) signature | 203 | 216 | IPR015500 | - | |
| Prci5g2098 | 750 | Gene3D | - | 616 | 742 | - | - | |
| Prci5g2098 | 750 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 102 | 599 | - | - | |
| Prci5g2098 | 750 | Pfam | Subtilase family | 126 | 570 | IPR000209 | GO:0006508|GO:0008236 | |
| Prci5g2098 | 750 | Gene3D | - | 334 | 476 | - | - | |
| Prci5g2098 | 750 | Pfam | Fibronectin type-III domain | 645 | 739 | IPR041469 | - | |
| Prci5g2098 | 750 | Pfam | PA domain | 372 | 453 | IPR003137 | - | |
| Prci5g2098 | 750 | CDD | Peptidases_S8_3 | 97 | 565 | IPR034197 | - | |
| Prci5g2098 | 750 | FunFam | subtilisin-like protease SBT1.5 | 334 | 476 | - | - | |
| Prci5g2098 | 750 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 29 | 98 | IPR037045 | - | |
| Prci5g2098 | 750 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 36 | 739 | IPR045051 | - | |
| Prci5g2098 | 750 | CDD | PA_subtilisin_like | 340 | 469 | - | - | |
| Prci5g2098 | 750 | FunFam | Subtilisin-like protease SBT1.5 | 126 | 347 | - | - | |
| Prci5g2098 | 750 | SUPERFAMILY | Subtilisin-like | 97 | 603 | IPR036852 | GO:0004252|GO:0006508 | |
| Prci5g2098 | 750 | Gene3D | Peptidase S8/S53 domain | 126 | 612 | IPR036852 | GO:0004252|GO:0006508 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Prci5g2098 | Prci-Chr5 | 38458663 | 38463757 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Prci5g2098 | 36 | 741 | Subtilisin-like Serine Gene Family | AT2G04160 | 42.819 | 0.0 | 565 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Prci5g2098 | - | - | gmx:100819201 | 1185.24 |