Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g2097 ATGCTTTCCCTCCCATGCAGCTTCAAGCTTCATCATCATCAGCCGCCTCGCCGCCACAACCCTGACATGAATCCACGCCCATGCGTCTCCCTCGCCGCCGCCTTCATATGCATTCTGCAGTTTCTGTTCCCGGCGGCGATGTCCCAGCCCCAAAACATGAGAACAAAACAATACGTCTTCGGCCCCTTCGACGTCTCTTATTACGAAACCTTGAAGGTCATTCAACCGGCATCGATCAACTTCGGAGCCCTACAAGTAACTCCGGACACCGCTGGTAACATCAACCTCACAGACACCTCCGGTCGAATCCTCTTCCGGCAGCCCTTCAAACTCTGGGAAGACGACGGAAAGATTGCTTCCTTCAATACTTCCTTCCTCATCAACGTCTTTCGCGTCAACAACGCCACTCCCGGAGAAGGCGTCGCCTTCGCCATTTCCCCATCCCTCGACCTTCCCCGGAACAGCCACGGCCAGTACCTCGGCCTTACCAACTCCACCACCGATGGCAATCCCGACAACCACATCGTCGCAGTCGAACTGGACACCGTCAAGCAGGAGTTCGACCCCGACGACAACCACATCGGACTCAACATCAACAGCGTCAAATCTAAAACCAATGTGTCCCTGTCTCAATTCGGAATCCAGATCGCTCCAGACGGCGCCAAATACTATGTTATCTGGATAGACTACAACGGTTCGAGCAAGAAAATCAACGTATTCATCACAGAACAACCTGACAGAAACGCTCCCATAGTATCAAAACCCAAAGAACCAGTGTTGACTTCAGATCTGGATCTCAGAAACATCGTGAAACAGAGCTCTTACTTCGGGTTCTCTGCTTCCACAGGAACAACCTACCAGCTGAACTGTGTTCTGAGATGGAACATGACAGTGGAGGTTCTTTCGGAAAACAAGAACAAGACGCGATCTTTGAGGATCAGTCTGGGTATTGGGGTGCCATTGATGAGTTTGATTGTTGTAGGGATCGGTGGGTGGGTGTATTGTGTGTACAGAAAGAAGAGAAGAAGAAGGCTGGATGACGAACAGATACTGGGGACGCTGAAGAGCTTGCCGGGAACGCCGAGAGAATACTCGTTCAAGGAATTGAAGAAGGCGACGAATAATTTCAGCGAGAAGAACAAGCTCGGAGAAGGAGGGTTTGGGATGGTGTACAGAGGGATCTTGCAGAAAGAGAATAACATGGAAGTGGCAGTGAAGAAATTCTGCAGAGACAAGATGAAATGCAAAGATGATTTCTTGGCTGAACTCACCATCATCAATCGTCTTCGTCACAAGCATCTTGTTCGCTTACTAGGGTGGTGCCACAAGAATGGTGTGTTAGTGTTAGTGTACGAGTTCATGCCCAATGGCAGCTTAGATAATCACCTTTTCTTTGAGGAAGCTAAATCCACAACCCCTCTCAGTTGGCACCTCCGTTACAAAATTATCTCCGGAGTAGCCTCGGCACTTAACTACCTTCACAACGAGTACGATCAAAAAGTGGTTCACAGAGATCTCAAAGCCAGCAACATCATGCTCGACTCTGACTTCAACGCTCGCCTCGGCGATTTCGGCCTGGCTCGAGCCATTGAGCACGAGAAAACATCGTACGCCGAGGTTGAAGGCATCCACGGCACGATGGGGTACATCGCGCCGGAGTGCTTCCACACGGGCAAGGCCACACGACAGTCTGATGTGTTCAGCTTTGGAGCGGTTCTTCTCGAAGTGGTGTGTGGCGAGAGGCCATGGACGAAGAAGGAAGGCTTTCAGTTGTTGGTGGATTGGGTTTGGTATTTGTATGGCGAAGGCAGGATTCTTGAGGCAGTGGACGAAAGGCTTGGGAATGAGTACGACGTTGAAGAAGCTGAGAAAATATTGAAACTAGGGTTAGCTTGTTCTCATCCTATTGCTAGTGAGAGGCCGAAGATGCAGAGTATAGTGCAGATTCTAAGCGGGGCTGTTCCTGTGCCTTACGTGGCTCCGTGCAAGCCTGCTTTTATTTGGCCTGCTGTGGATTTTGGAAGCTTCCTCAGTGATCTCACAACACCATCTTCTGCCACTGTAAACACACCGTTTCACACAGATTCAGACCCTCTACATTTATCAAAGTGA 2112 0.5005 MLSLPCSFKLHHHQPPRRHNPDMNPRPCVSLAAAFICILQFLFPAAMSQPQNMRTKQYVFGPFDVSYYETLKVIQPASINFGALQVTPDTAGNINLTDTSGRILFRQPFKLWEDDGKIASFNTSFLINVFRVNNATPGEGVAFAISPSLDLPRNSHGQYLGLTNSTTDGNPDNHIVAVELDTVKQEFDPDDNHIGLNINSVKSKTNVSLSQFGIQIAPDGAKYYVIWIDYNGSSKKINVFITEQPDRNAPIVSKPKEPVLTSDLDLRNIVKQSSYFGFSASTGTTYQLNCVLRWNMTVEVLSENKNKTRSLRISLGIGVPLMSLIVVGIGGWVYCVYRKKRRRRLDDEQILGTLKSLPGTPREYSFKELKKATNNFSEKNKLGEGGFGMVYRGILQKENNMEVAVKKFCRDKMKCKDDFLAELTIINRLRHKHLVRLLGWCHKNGVLVLVYEFMPNGSLDNHLFFEEAKSTTPLSWHLRYKIISGVASALNYLHNEYDQKVVHRDLKASNIMLDSDFNARLGDFGLARAIEHEKTSYAEVEGIHGTMGYIAPECFHTGKATRQSDVFSFGAVLLEVVCGERPWTKKEGFQLLVDWVWYLYGEGRILEAVDERLGNEYDVEEAEKILKLGLACSHPIASERPKMQSIVQILSGAVPVPYVAPCKPAFIWPAVDFGSFLSDLTTPSSATVNTPFHTDSDPLHLSK 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g2097 703 PANTHER - 88 654 - -
Prci5g2097 703 SUPERFAMILY Protein kinase-like (PK-like) 358 682 IPR011009 -
Prci5g2097 703 SUPERFAMILY Concanavalin A-like lectins/glucanases 56 300 IPR013320 -
Prci5g2097 703 Gene3D Phosphorylase Kinase; domain 1 361 453 - -
Prci5g2097 703 Pfam Legume lectin domain 57 308 IPR001220 GO:0030246
Prci5g2097 703 ProSitePatterns Serine/Threonine protein kinases active-site signature. 501 513 IPR008271 GO:0004672|GO:0006468
Prci5g2097 703 FunFam probable L-type lectin-domain containing receptor kinase S.5 361 453 - -
Prci5g2097 703 Pfam Protein tyrosine and serine/threonine kinase 379 650 IPR001245 GO:0004672|GO:0006468
Prci5g2097 703 FunFam probable L-type lectin-domain containing receptor kinase S.5 454 655 - -
Prci5g2097 703 Gene3D Transferase(Phosphotransferase) domain 1 454 655 - -
Prci5g2097 703 ProSitePatterns Protein kinases ATP-binding region signature. 382 407 IPR017441 GO:0005524
Prci5g2097 703 SMART serkin_6 376 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g2097 703 ProSitePatterns Legume lectins beta-chain signature. 176 182 IPR019825 -
Prci5g2097 703 CDD STKc_IRAK 382 650 - -
Prci5g2097 703 CDD lectin_legume_LecRK_Arcelin_ConA 77 298 IPR001220 GO:0030246
Prci5g2097 703 ProSiteProfiles Protein kinase domain profile. 376 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g2097 703 Gene3D - 56 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g2097 Prci-Chr5 38433990 38439308 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g2097 82 662 Receptor kinase-like Gene Family AT3G53810 40.291 1.50e-127 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Prci5g2097 PK_Tyr_Ser-Thr 6.8e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g2097 - - gmx:100784558 924.465