Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g2094 ATGGCGGCACTATTGGCATCGCTGGTAGCAGGGGGAGACGTATCTAAGGCTCACTTGTTTATGGTGATGGTCCAGCTTTTCAGTGGAGGATACCACGTCATCACCAAAGTAGCCCTCAATGTTGGAATCGACCAATTAGTGTTCTGCGTTTTCCGCGATCTCATTGCCCTCGCTATTCTCGCTCCAATCGCTTACATCCGTGAAAAACGGACACGACCACCCATGACTAAGCGCCTCCTGATATCATTTTTCTTTCTCGGATTGACAGGGATTTTCGGCAACCACCTTTTGTTCCTTATTGGTTTAAGCTATACTAATCCAACTTATGCAGCTGCCATTCAACCAGCCATTCCAGTCTTCACTTTTCTTTTGGCTGTAATGATGGGTACAGAAAGGGTGAATTTACTCAGATATGAAGGTCTGGCAAAGGTTGGAGGAACTCTTGTCTGTGTTTGTGGTGCCATATTTATGGTTTTGTTCCGTGGTCCAGCATTGATAGGATATGCAGATTCAGACATTTTAGCACATAGTGAAATAACTGCAAGAGGTCAACCTGAGCCATATGGATGGTTAATTGGTGGTTTAATGGATCTTGGTTTGGACCATTTCCATCTTGGGGTTTTGTGCTTGATAGGAAACTGCATGTGCATGGCCACTTTTCTGGCCATTCAGGCTCCACTATTGAAAAAGTATCCCGCAAACCTATCTGTCACAGCATACTCATACTTTTTTGGAGCTTTGCTAATGGTGACAACAGCATTCTTCATGACCAATGAGTCAACTGACTGGAGCTTGACACCATCTGAAACGTTTGCTGTTATTTATGCTGGAACCATTGCATCTGCCCTTAACTATGGACTCCTGACATGGTGCAACAAGGTTTTGGGTCCGGCTATGGTTGCCCTTTATAACCCACTTCAACCTGCAGCATCCGCCCTTCTGTCACGAATTTTCCTTGGAAGTCCTATTTTCTTGGGAAGTGTCCTCGGGGGATCTTTGATCATTGCCGGTCTATATGCTGTCACTTGGGCAACTTACAGGGAAAGACAAGCAGCACTTGGAGTTGTTCCTCAGGGCTCTTGGGTCCCTGAACAAATTATTCATACAGATGGATTAGTGAGCAAGAGTTCATTTCAGTTAGGTCACATTTTTTCCGGGTCACCCAAGTCTTCTGATTAA 1179 0.4495 MAALLASLVAGGDVSKAHLFMVMVQLFSGGYHVITKVALNVGIDQLVFCVFRDLIALAILAPIAYIREKRTRPPMTKRLLISFFFLGLTGIFGNHLLFLIGLSYTNPTYAAAIQPAIPVFTFLLAVMMGTERVNLLRYEGLAKVGGTLVCVCGAIFMVLFRGPALIGYADSDILAHSEITARGQPEPYGWLIGGLMDLGLDHFHLGVLCLIGNCMCMATFLAIQAPLLKKYPANLSVTAYSYFFGALLMVTTAFFMTNESTDWSLTPSETFAVIYAGTIASALNYGLLTWCNKVLGPAMVALYNPLQPAASALLSRIFLGSPIFLGSVLGGSLIIAGLYAVTWATYRERQAALGVVPQGSWVPEQIIHTDGLVSKSSFQLGHIFSGSPKSSD 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g2094 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 243 346 - -
Prci5g2094 392 Pfam EamA-like transporter family 17 142 IPR000620 GO:0016020
Prci5g2094 392 Pfam EamA-like transporter family 205 342 IPR000620 GO:0016020
Prci5g2094 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 160 - -
Prci5g2094 392 PANTHER WAT1-RELATED PROTEIN 19 349 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g2094 Prci-Chr5 38393697 38398165 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g2094 100 350 Nodulin-like Gene Family AT5G45370 71.713 1.08e-127 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g2094 - - gmx:100809051 614.379