Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g2089 ATGGCTTCTGATTCCCTCCACTCTACTGTCCATCAGCAACCCTCACCAAACCTCACTTCGTTCCCCATCATTTTGAAGTTTGAGGAGGTGGTGTACAAAGTGAAACCAGACCATAGAGGACTGTGTCGGGGAAGAAGTTCATGGAGTTCCACAGAGAAGACGATACTGAACGGAATCACAGGCATGGTATTTCCAGGTGAGATTCTGGCCATGTTGGGCCCTTCGGGAAGTGGCAAAACGACACTTCTCACAGCTCTCGGAGGTCGTTTAATTGGCAGATTATCGGGCAAAATCACCTACAACGACCAACCTTTCTCAGGTTCCATAAAGAGAAGAACAGGCTTCGTGGCTCAGGACGATGTTCTATACCCACACCTCACAGTTTCTGAAACTCTGATCTTCACCGCACTTCTCAGGCTTCCCAACAGCCTCACGAATAACGACAAGATTGCTCACGCCGAGAGAGTCATCACAGAGCTGGGCCTGACACGGTGCAGGAACAGCATCGTCGGAGGGGCATTGATCAGAGGAATATCAGGTGGAGAGAAGAAGCGAGTGAGCATAGGTCAAGAAATGCTAATAAATCCGAGCTTGTTGCTGCTAGACGAGCCCACTTCGGGGTTGGACTCCACGACGGCGCAAAGGATATTGACCACCATCAAAGGGGTGGCGCGTGGCGGAAGGACGGTGGTGACCACCATCCACCAACCGTCGAGCCGGCTGTATCATATGTTTGATAAGGTGGTGGTGCTGTCGGAAGGACGATGTATATATAACGGACCTGCATCGGCGGCCATGGAGTATTTTTCTTCTATCGGCTTCTCCACATCCATCACTCTCAATCCTGCTGACTTCTTGCTCGATCTTGCTAACGGGATTGCCCCAGACCCCGAGCATGCAAGCGAACAAAGTGAGGGCCTGGAACAAGAAAGGAAGCTAACCAGAGAAGCTCTCATTTCTGCTTATGACAAGAACATTGCTCCCAAGTTGAAACTTGAGATTTCTAACTCGAGAATGGACATCTACAGCTTCAACAAGCATGCTTCATCTAGAAATGACCCAACAAAAGCAGAGCAATGGTGCACAAGCTGGTGGTATCAGTTCAAGGTGCTGTTACAGAGAGGACTCAAAGAACGAAGGTATGAAGCCTTCAATAGATTGAGAATATTCCAAGTCATAAGTGTGGCTTTTCTTGGTGGACTCTTGTGGTGGCATACCCCAGAATCTCACATTCAAGACAGGGTAGCGTTACTGTTTTTCTTCTCAGTTTTCTGGGGATTCTACCCTCTCTACAACGCAGTTTTCACTTTCCCACAAGAGAGAAGAATGCTGATCAAGGAGAGGTCTTCAGGAATGTATCGTCTCTCTTCCTACTTTATGGCAAGAACAATAGGAGACCTGCCATTGGAGCTGGCACTTCCTACTGCATTCGTGTTCATAATCTATTGGATGGGAGGGCTCAAGCCTCATCCCGTGACTTTCATTCTATCACTTCTCGTGGTCCTGTACAGCGTTCTCGTGTCTCAGAGTCTGGGATTGGCATTCGGAGCTATTCTCATGGAGATCAAGCAGGCCACAACCCTAGCTTCTGTCACAACCCTCGTGTTCCTCATTGCTGGAGGCTACTACGTTCAACAGATCCCTCCATTCATAGCTTGGCTCAAGTACTTGAGCTATAGCTATTACTGTTACAAGCTGCTTCTGGGTGTTCAGTACGATGAAGAAGATTATTATGAGTGTTCCAATGGGGTTTTGTGCAGAGTAGAAGATTTCGGTCCCATCAAATCAATGGGTTTGAATCAATTGTGGGTGGATGTGCTCATGATGGCTCTCATGTTGGTGGGTTATCGACTAGTTGCTTATTTAGCACTACGTAGGGTGAGGTAG 1887 0.4807 MASDSLHSTVHQQPSPNLTSFPIILKFEEVVYKVKPDHRGLCRGRSSWSSTEKTILNGITGMVFPGEILAMLGPSGSGKTTLLTALGGRLIGRLSGKITYNDQPFSGSIKRRTGFVAQDDVLYPHLTVSETLIFTALLRLPNSLTNNDKIAHAERVITELGLTRCRNSIVGGALIRGISGGEKKRVSIGQEMLINPSLLLLDEPTSGLDSTTAQRILTTIKGVARGGRTVVTTIHQPSSRLYHMFDKVVVLSEGRCIYNGPASAAMEYFSSIGFSTSITLNPADFLLDLANGIAPDPEHASEQSEGLEQERKLTREALISAYDKNIAPKLKLEISNSRMDIYSFNKHASSRNDPTKAEQWCTSWWYQFKVLLQRGLKERRYEAFNRLRIFQVISVAFLGGLLWWHTPESHIQDRVALLFFFSVFWGFYPLYNAVFTFPQERRMLIKERSSGMYRLSSYFMARTIGDLPLELALPTAFVFIIYWMGGLKPHPVTFILSLLVVLYSVLVSQSLGLAFGAILMEIKQATTLASVTTLVFLIAGGYYVQQIPPFIAWLKYLSYSYYCYKLLLGVQYDEEDYYECSNGVLCRVEDFGPIKSMGLNQLWVDVLMMALMLVGYRLVAYLALRRVR 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g2089 628 Pfam ABC-2 type transporter 366 572 IPR013525 GO:0016020|GO:0140359
Prci5g2089 628 SMART AAA_5 65 255 IPR003593 GO:0016887
Prci5g2089 628 ProSitePatterns ABC transporters family signature. 178 192 IPR017871 GO:0005524|GO:0016887
Prci5g2089 628 Gene3D - 45 272 IPR027417 -
Prci5g2089 628 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 14 621 - -
Prci5g2089 628 Pfam ABC transporter 56 206 IPR003439 GO:0005524
Prci5g2089 628 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 25 278 IPR003439 GO:0005524
Prci5g2089 628 Pfam ABC-2 type transporter 235 309 IPR043926 GO:0140359
Prci5g2089 628 CDD ABCG_EPDR 22 260 - -
Prci5g2089 628 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 51 272 IPR027417 -
Prci5g2089 628 FunFam ABC transporter G family member 22 44 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g2089 Prci-Chr5 38340038 38343224 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g2089 66 263 Calmodulin-binding Proteins AT2G36910 25.123 7.26e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g2089 K05681 - gmx:100794774 978.393