Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g2072 ATGAATAGCATCAACGACGACAACTGCAGACAAGATCTCGACCCTCAAAGTGACCACAGTTCCGACTATTTAGCTCACTCTCTTCCTCTCCAACCTCAGCCCCAGCCCCAGCCTCGCCGCCCTCGTGGCTTCGCAGCCACGTCTGCGGCGGCTACCGGCGCTCCCAATTCCGCCGGAAAGGGCAAGAAAGAGAGAGAGAAAGAGAAGGAGCGCACCAAGCTCCGAGAGCGTCACCGTCGAGCAATCACTAGCCGTATGCTCGCCGGCCTCCGTCAATATGGTAATTTCCCTCTCCCGGCGCGTGCTGACATGAATGATGTGCTTGCTGCCCTCGCCCGTGAGGCTGGTTGGGTTGTCGAGGCAGATGGTACCACCTACCGTCAGTGCCCGCCTCCTTCGCAAATGGCATCATTTGCTGCGGGGTCAGTTGAAACCCCACTCTCTGCAGGTTCTTTAAGAGCTTGCACTGCTAAAGAAACACTAGAGAATCAGCCACAAGTACTTAGAATTGATGAAAGCTTGTCACCTGCATCCATTGATTCTGTTGTAATTGCAGAGAGGGATTCAAAGAATGAGAAATATCCAAGTGCAAGCCCTATCAATCCAGTTGACTGCTTGGAGGCTGATCAGCTCATGCAGGATATTCATTCTGGGGTGCATCGGAATGATTTTACAGGCACTCCTTATGTTCCTGTTTATATAAAACTTCCAGCTGGTATTATTAACAAATTTTGCCAGTTGATTGATCCTGAAGGACTTAGACAGGAGCTAATTCACATGAAGTCTTTAAATTTTGATGGTGTCATTGTGGATTGTTGGTGGGGCATTGTGGAAGGCTGGAGCCCACAGAAATATGTGTGGTCTGGCTATAGGGAGCTCTTTAACATTGTTAGAGAAATCAAGTTGAAGTTGCAGGTTGTTATGGCTTTTCATGAATATGGAGGGGATGATTCTAGTGATCCGCTCATTGCCCTCCCGCAATGGATTTTGGAGATTGGAAAAGACAACCGGGATATTTTTTTCACAGATCGTGAAGGACGGAGGAATACTGAATGTCTTTCTTGGGGCATTGACAAAGAGAGAGTTCTGAAAGGAAGAACTGGAATTGAGGTCTATTTTGATTTCATGAGAAGCTTTCGGACAGAGTTTAATGACCTGTTTGCTGAGGGCCTCATTTCTGCTGTAGAAATTGGACTTGGGGCATCTGGGGAGCTGAAATATCCTTCTTTTTCGGAAAGGATGGGATGGAGGTACCCTGGTATTGGTGAGTTTCAGTGTTATGATAAATATCTGCTACAAAGTCTACGCAGAGCAGCCAAATCACGTGGTCACACTTTCTGGGCTAGAGGACCTGATAATGCTGGACAATACAATTCTATGCCACATGAAACTGGATTCTTTTGTGAGCGGGGCGATTACGACAGTTATTATGGGCGCTTCTTCTTGCATTGGTATGCCCAGTCATTAATAGACCATGCAGATAATGTTTTGTCTCTTGCAAGCCTGGCTTTTGAGGAAAAAAGACTAATTGTCAAGGTTCCTGCTGTATACTGGTGTTACAAGACTGGTAGTCATGCAGCAGAGTTGACGGCAGGATATCACAATCCTGCGAACCAGGATGGATACTCTCCTGTTTTTGAGGTTCTAAAAAAACATGGTGTGACCATGAAGTTTGTCTGCTTAGGATTTCAGCTTTCTAGTCAGGAAGCTGACGAGTCATTGGCTGACCCAGAGGGCTTGACTTGGCAGGTATTGAACTCATCCTGGGATCGAGGGTTGATAGTAGCTGGAGAGAATGCAATGCCTTGTTATGAGAGAGAAGGATTCAAGAGACTAGTTGATATCGCGAAGCCAAGAAATGATCCTGATCACCACCTCTTTTCATTTTTTGCATATCAACAACCTTCCATGGTTCAGGGGAATATTTGCTTGCCAGAGTTGGATCACTTCATCAAATGTATGCATGGTGACATGATGGGGGATCTGTAA 1989 0.4641 MNSINDDNCRQDLDPQSDHSSDYLAHSLPLQPQPQPQPRRPRGFAATSAAATGAPNSAGKGKKEREKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVLAALAREAGWVVEADGTTYRQCPPPSQMASFAAGSVETPLSAGSLRACTAKETLENQPQVLRIDESLSPASIDSVVIAERDSKNEKYPSASPINPVDCLEADQLMQDIHSGVHRNDFTGTPYVPVYIKLPAGIINKFCQLIDPEGLRQELIHMKSLNFDGVIVDCWWGIVEGWSPQKYVWSGYRELFNIVREIKLKLQVVMAFHEYGGDDSSDPLIALPQWILEIGKDNRDIFFTDREGRRNTECLSWGIDKERVLKGRTGIEVYFDFMRSFRTEFNDLFAEGLISAVEIGLGASGELKYPSFSERMGWRYPGIGEFQCYDKYLLQSLRRAAKSRGHTFWARGPDNAGQYNSMPHETGFFCERGDYDSYYGRFFLHWYAQSLIDHADNVLSLASLAFEEKRLIVKVPAVYWCYKTGSHAAELTAGYHNPANQDGYSPVFEVLKKHGVTMKFVCLGFQLSSQEADESLADPEGLTWQVLNSSWDRGLIVAGENAMPCYEREGFKRLVDIAKPRNDPDHHLFSFFAYQQPSMVQGNICLPELDHFIKCMHGDMMGDL 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g2072 662 Gene3D Glycosidases 220 661 - -
Prci5g2072 662 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 163 656 IPR001554 GO:0000272|GO:0016161
Prci5g2072 662 Pfam BES1/BZR1 plant transcription factor, N-terminal 59 205 IPR008540 -
Prci5g2072 662 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 307 328 IPR001554 GO:0000272|GO:0016161
Prci5g2072 662 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 580 602 IPR001554 GO:0000272|GO:0016161
Prci5g2072 662 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 285 303 IPR001554 GO:0000272|GO:0016161
Prci5g2072 662 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 524 535 IPR001554 GO:0000272|GO:0016161
Prci5g2072 662 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 507 523 IPR001554 GO:0000272|GO:0016161
Prci5g2072 662 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 264 278 IPR001554 GO:0000272|GO:0016161
Prci5g2072 662 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 400 422 IPR001554 GO:0000272|GO:0016161
Prci5g2072 662 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 473 492 IPR001554 GO:0000272|GO:0016161
Prci5g2072 662 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 542 565 IPR001554 GO:0000272|GO:0016161
Prci5g2072 662 MobiDBLite consensus disorder prediction 1 76 - -
Prci5g2072 662 SUPERFAMILY (Trans)glycosidases 224 658 IPR017853 -
Prci5g2072 662 MobiDBLite consensus disorder prediction 59 76 - -
Prci5g2072 662 Pfam Glycosyl hydrolase family 14 249 632 IPR001554 GO:0000272|GO:0016161
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g2072 Prci-Chr5 38143946 38150827 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g2072 12 658 Glycoside Hydrolase AT5G45300 66.419 0.0 894
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Prci5g2072 Glyco_hydro_14 7.8e-85 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g2072 K01177 - gmx:100777004 1128.24