LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci5g2052	ATGGGCGTTTGTCTGATGAAATGGCAATGGCCATGGCTTCTTTGTGTTCTGCTGATATGTCATGTAATCAATAGGAATGAAGCAATCAGTCCTGATGGAGAGGCACTTCTTACCTTCAGGACAGCAGTTAGCCCCAATAGTGACCTGTTACCTTGGAGGCCTGAGGATCCTGACCCATGTAAATGGAAAGGAGTAACATGTGATCCCAAAACCAAGAGAGTGACAAATCTGTTTCTGGATCATCAAAAGTTAAGTGGGTCTATTTCAGCTGACCTTGGGAAGCTAGAGCATCTGAGGATTCTTGCTCTGAACAACAACTTCTTATATGGGACCATTCCATCAGAATTAGGAAATTGCACTGGATTGCAAGAAATATATTTGCATGGTAACTACCTTAGTGGAGTTATCCCAAGTGAAATTGGAAATCTCTCACAACTTCAAAATTTGGATATATCAAGTAACCTCCTTAGTGGGAGTATTCCTCCATCACTTGGGAAATTATATAATCTAAAAAATTTCAATGTGTCGTTCAATTTTCTGGTTGGACCAATACCTTTGGATGCTGTGCTTGCCAACTTCCCTGAAAGCTCCTTTGTTGGAAATCTTGGTTTGTGTGGGGTGCAAATCAATACAACGTGTGAGAATAATGGTTTGCCTAATTCCAATCCTCAATCTTCAATGTCAGACCAAAATCAAAGTGGAAAAAGGAAAGATTCTGGCCGGTTGCTTATTAGTGCATCAGCAACTGTGGGTGCACTACTTTTAGTGGCACTTATGTGCTTCTGGGGTTGCTTTCTTTATAAGAAGTTTGGTAAAAATCACAGAGAAAGTCTAGCAATGGATGTCTGTGGAGGGGCATCTATCGTAATGTTTCATGGAGATCTACCATACTCTTCAAAAGATATTATTAAAAAACTAGAGACTTTAAATGAGGAACACATAATTGGTTGTGGAGGATTTGGAAAAGTTTACAGGCTTGCAATGGATGATGGGAATGTATTTGCTTTGAAAAGGATTGTAAAGTTAAGTGACGGCTTCGATCGATTTTTTGAGAGAGAGCTTGAAATACTTGGTAGCATCAAACACAGATATCTTGTGAACTTAAGAGGATATTGCAATTCACCTTCATCAAAGTTGTTAATTTATGATTACCTAGCTGGTGGTAGTCTTGATGAAGCTCTTCATGAAAGATCTGAGCAGCTTGATTGGGATTCACGCTTGAATATCATCTTGGGAGCTGCAAAAGGGCTTGCCTACTTGCACCATGATTGTTCCCCTAGGATCATACACCGTGACATAAAATCAAGCAATATTTTGCTTGATGGAAACTTGGATGCTCGAGTCTCTGACTTTGGACTTGCCAAACTTTTGAAGGATGAAGAATCTCACATCACTACCATTGTTGCTGGAACATTTGGTTATCTAGCTCCAGAATATATGCAAAGTGGTAGAGCAACTGAAAAGAGCGATGTTTATAGTTTTGGTGTCCTGGTACTTGAAGTGTTAAGTGGAAAGCGGCCAACAGATGCATCATTCATTGAGAAGGGCCTCAATATTGTTGGTTGGTTAAATCATTTAATAACTGAGGACAGGGCAAGAGATATAGTCGATCCGCAATGTGAAGGAGTGCAGGTAGAGAGCCTGGATGCGTTGCTTTCTGTTGCTATACAGTGTGTATCATCGAGTCCGGATGATCGACCCACAATGCACAGAGTGATCCAGTTGATTGAATCAGAGGTGATGACCCCATGCCCAAGTGACTACTATGATTCCAACTCTGAATAG	1785	0.4062	MGVCLMKWQWPWLLCVLLICHVINRNEAISPDGEALLTFRTAVSPNSDLLPWRPEDPDPCKWKGVTCDPKTKRVTNLFLDHQKLSGSISADLGKLEHLRILALNNNFLYGTIPSELGNCTGLQEIYLHGNYLSGVIPSEIGNLSQLQNLDISSNLLSGSIPPSLGKLYNLKNFNVSFNFLVGPIPLDAVLANFPESSFVGNLGLCGVQINTTCENNGLPNSNPQSSMSDQNQSGKRKDSGRLLISASATVGALLLVALMCFWGCFLYKKFGKNHRESLAMDVCGGASIVMFHGDLPYSSKDIIKKLETLNEEHIIGCGGFGKVYRLAMDDGNVFALKRIVKLSDGFDRFFERELEILGSIKHRYLVNLRGYCNSPSSKLLIYDYLAGGSLDEALHERSEQLDWDSRLNIILGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLDARVSDFGLAKLLKDEESHITTIVAGTFGYLAPEYMQSGRATEKSDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNHLITEDRARDIVDPQCEGVQVESLDALLSVAIQCVSSSPDDRPTMHRVIQLIESEVMTPCPSDYYDSNSE	594

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci5g2052	594	ProSiteProfiles	Protein kinase domain profile.	309	581	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci5g2052	594	Pfam	Protein kinase domain	311	574	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci5g2052	594	FunFam	LRR receptor-like serine/threonine-protein kinase IOS1	385	588	-	-
	Prci5g2052	594	FunFam	LRR receptor-like serine/threonine-protein kinase FEI 1	283	384	-	-
	Prci5g2052	594	Gene3D	Ribonuclease Inhibitor	30	214	IPR032675	-
	Prci5g2052	594	SUPERFAMILY	L domain-like	43	196	-	-
	Prci5g2052	594	Pfam	Leucine Rich Repeat	145	167	IPR001611	GO:0005515
	Prci5g2052	594	FunFam	LRR receptor-like serine/threonine-protein kinase ERECTA	29	190	-	-
	Prci5g2052	594	Pfam	Leucine rich repeat N-terminal domain	31	68	IPR013210	-
	Prci5g2052	594	PANTHER	LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1	73	577	-	-
	Prci5g2052	594	ProSitePatterns	Protein kinases ATP-binding region signature.	315	341	IPR017441	GO:0005524
	Prci5g2052	594	MobiDBLite	consensus disorder prediction	217	233	-	-
	Prci5g2052	594	Gene3D	Transferase(Phosphotransferase) domain 1	385	583	-	-
	Prci5g2052	594	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	428	440	IPR008271	GO:0004672\|GO:0006468
	Prci5g2052	594	MobiDBLite	consensus disorder prediction	217	236	-	-
	Prci5g2052	594	SMART	serkin_6	309	581	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci5g2052	594	Gene3D	Phosphorylase Kinase; domain 1	285	384	-	-
	Prci5g2052	594	SUPERFAMILY	Protein kinase-like (PK-like)	294	575	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci5g2052	Prci-Chr5	38042351	38052452	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci5g2052	1	585	Receptor kinase-like Gene Family	AT2G35620	73.549	0.0	853

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-XIIIa	Prci5g2052		Pkinase	1.5e-45	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci5g2052	-		-	gmx:100819230	1004.2