Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g2050 ATGTTCGGAGGCGGAGATGACGAAGCCTTGTCCCGCTTGGGCATCATGACGCCTTCCCTCCTCAAAACGGCCTCGTCGTCGTTGATTTCCGGTGAGATGTCTCCGTCGACGGCAGCTGCGATGGTAAGGGACGACAGGGCTCCAGCGCAGCCGCAGTGGGGCCAGCAGGAAACGAGGGAGTTCATAGCGATCCGCGCGGAGCTGGAACGGGACTTCACTGCGTCTAAGCGAAATAAGACCCTCTGGGAGGTAGTCAGCGCCAAGATGAGGGAGAGAGGCTTTAGAAGGAGTCCTGAACAGTGTAAATGCAAGTGGAAAAACCTTGTTAATCGTTATAAGGGGAAAGAGACATCAGATCCGGAGCATGGGAGGCAATGTCCTTTCTTTGACGAATTACATGCCATCTTTGCTCAAAGAGCGCAGAACATGCAGCGGTTACTTCTTGAATCTGAGGCCCGTTCAACTCAGACAAAGAAGGGGGTGAAAAGACTAAGTGGAGACCGGTCATCAGAGGAATTCTCGGAAGATGATGACGAGGTTGAAGAAGACAGTGAAGAGGAGAGACCTGTAAGAAGCAACTCTCGCAAAAGGAAAGCAGATAAGGTTGCAATGGAGAAATCTTCAAGGGCAAACAATGCATCAGATACTATCAGTAATACTGCTAATAGCATTCAGGAAATGCTCAAGGAATTTTTCCAGCAGCAACTGAGGATGGAGATGCAGTGGAGGGAGATGATGGAAAGGCGTGCTCATGAAAGGCAGCTGTTTGAGCAGGAATGGCGGCAGTCAATGGAGAAGCTTGAGAAGGAGAGATTGAGGATTGAGCAGGCATGGAGGGAGAGAGAAGAGCAGAGAAGAATGAGAGAAGAGAGCCGAGCAGAAAGGAGAGATGCACTGTTGACGTCCCTTTTGAACAAGCTCATCCATGAATCTAATTAG 939 0.5005 MFGGGDDEALSRLGIMTPSLLKTASSSLISGEMSPSTAAAMVRDDRAPAQPQWGQQETREFIAIRAELERDFTASKRNKTLWEVVSAKMRERGFRRSPEQCKCKWKNLVNRYKGKETSDPEHGRQCPFFDELHAIFAQRAQNMQRLLLESEARSTQTKKGVKRLSGDRSSEEFSEDDDEVEEDSEEERPVRSNSRKRKADKVAMEKSSRANNASDTISNTANSIQEMLKEFFQQQLRMEMQWREMMERRAHERQLFEQEWRQSMEKLEKERLRIEQAWREREEQRRMREESRAERRDALLTSLLNKLIHESN 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g2050 312 MobiDBLite consensus disorder prediction 186 205 - -
Prci5g2050 312 Coils Coil 257 284 - -
Prci5g2050 312 ProSiteProfiles Myb-like domain profile. 53 109 IPR001005 -
Prci5g2050 312 FunFam Zinc finger and SCAN domain-containing 20 53 114 - -
Prci5g2050 312 PANTHER FI21293P1 45 309 - -
Prci5g2050 312 SMART sant 49 111 IPR001005 -
Prci5g2050 312 MobiDBLite consensus disorder prediction 151 218 - -
Prci5g2050 312 CDD GT1 51 116 - -
Prci5g2050 312 MobiDBLite consensus disorder prediction 171 185 - -
Prci5g2050 312 MobiDBLite consensus disorder prediction 155 170 - -
Prci5g2050 312 Gene3D - 53 114 - -
Prci5g2050 312 Pfam Myb/SANT-like DNA-binding domain 51 135 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g2050 Prci-Chr5 38023935 38025998 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g2050 34 307 Trihelix Transcription Factor Family AT2G38250 44.964 6.46e-50 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Prci5g2050 Myb_DNA-bind_4 3.2e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g2050 - - pcin:129311173 527.324