Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g2039 ATGGAGTATGATTCCGATAGCCCCTCACAAGATGGGAGGGATGAAGATGATGATGAAGAATATGAGGAGGCTGGCAAGGGCAATCGTTTGCTGGGATTCATGTTTGGAAATGTTGACAATTCTGGTGATCTTGATGTCGATTACCTTGATGAGGATGCAAAGGAGCATCTTTCTGCACTTGCTGACAAGCTGGGTCCTTCCCTGACAGATATAGATTTGTCAGGAAAATCGCCACAAACACCACCAGACATTGTCGAACAAGACTATGGTGAGAAAGCTGAAGATGCAGTTGATTATGAAGATATTGATGAAGAGTATGATGGTCCAGAGACTGAAGCTGCAAATGAAGAGGAACATTTATTGCCCAAAAAGGATTTTTTTTCTGCTGAAGCCTCTCTTGAAGCTTTGAAATCCAGATCTTCTGTCTTTGATGATGAAAATTATGATGAGGAATCTGAAAAGGAGGAGGACTTGGTGAATAACACTTCTGAAATTAATAACATCTCTTCAACTGCAGAGCTGGTAGAGTCTCTTATTGATGCATCTAAAGGAGAGAAAAGTCTAGAACTTGAATCACATGATGGCTCACAGCAGTCTGAAGAATTGGATACTGACTCGCAAAAGCTCCAGGAGGAAGGGCCTGAAGTTTTGAAAGGTTCTACTCCTTTGCCTGTTTTATGTGTGGAAGATGGGATGGTCATTTTAAGGTTCTCTGAGATTTTTGGTATTCATGAACCTTTGAGAAAGGGAGGGAGGAGAGAGCAACGACCTTCTATTCCTAGAGAGAGATACAAGTCCTTTAATTTATCTGATATTGTAGAAGAGGATGAAGAGACATTCTTCAGAGGTTCTTCTTATAGTCTCCTACTAAATAAACAGGCTTGTGTAGTTCAAAATGGTATATCAGAAAGCAGTAATGCAGACTCAGACTTGTCAAAATTTGGATTTCTTCATGGGGTTGCCTCAATGTCCGTGAAAGATGGACCACAACAGAAGCACTCTTGTCTTAGTGGTGAACCAATGAAACATGATTGCTCAGGCCTTTCTTGGGAAGGGCATTCTCTCTTTTGCTCTGACTTTTATCCCCTTGATCAGCAAGACTGGGAAGATGAAATCATTTGGGGAAATTCCCCTGCTGTAAGTGACAATAATCTTGAGAGCTCTGAAATTTCTGGACCTACTTTGGGACCTCTAGGGTGTGATGGAGAAATTGAAAGTGGGATGCAAAATATCCAGTTGGAGCTGCCGAAGGAATTGGAAGAAAGAAATCATGGTGTTTTCATGTGCAGCTCTCCTGTCTCATTAGAGCCCTTTGGCTCAAGAGATTCTTCAGGAGCTAAAGCCAATTCATTGTCAAAGAGCCTATTTCACCCGCAACTATTGAGGTTAGAATCCAGGCCTGAAGTGGATGCCTCTAATCCTGCCGATGACAGAAGGGAGAATATATCTGAGGAGCATAATCAAAATGGACTAGCAAAGCATTGCACCAAACTTGCCTTGCAAAACCAGGATATGATGGAAGGGTCTTGGTTAGACAACATTATATGGGAGGAGGTCAATAGACCTATTGTGAAACCAAAGCTTATCTTTGATCTTCAGGATGATCAAATGCACTTTGAAGTTTTGGATAGTAAAGATGGTAGGCATCTCCGCCTGCATGCAGGAGCAATGATTTTAACTCGTCCTTTAAGATCGAGCAGTGGAGATTCTTCTGAGCTACCTGGACATGGAAATCAGTATGGATGGCGATCCATTGCTAATGATAAACATTATTCAAACAGGAAAACTTCCCAGCAACTTAAATCAAATTCGAAAAAGCGCTCAGCTCATGGTGTAAAAGTTTTTCACTCTCAGCCTGCGCTGAAGCTTCAGACAATGAAATTGAAACTGAGCAACAAAGATATTGCTAATTTCCACCGACCAAGAGCTTCGTGGTATCCCCATGACAATGAGATGGCTGTCAAAGAACAAGGGAAACTACCAACGCAAGGACCGATGAAAATTATCATGAAGAGCTTGGGCGGCAAGGGGAGTAAGCTGCATGTTGATGCTGAAGAAACTCTCTCTTCCATTAAAGCAAAAGCATCTAAAAAGCTAGATTTTAAGCCACTGGAAACAGTGAAAATATTTTATCTTGGGAAGGAACTTGAAGATCAGAAATCACTTGCTGCACAAAATGTTCGACCAAATTCCTTGTTGCATCTTGTTCGTACAAAGATACATTTGTGGCCTAGGGCACAGAGGCTTCCCGGTGAGAACAAATCCTTGCGTCCACCTGGGGCATTCAAGAAAAAGTCTGATCTATCTGTTAAAGATGGACATGTTTTTCTAATGGAGTACTGTGAGGAAAGACCTTTATTACTGAGCAATGCTGGAATGGGTGCCAGACTTTGTACGTACTATCAAAAATGTTCTCCAGATGATCAAGGTGGCTCTTTATTACGCAACACAAATAGTAGTTTGGGGCATGTGATTTCACTGGATCCTGCTGATAAATCTCCATTTCTTGGAGATTTGAAACCTGGCTGTAGTCAGTCATCACTGGAGACAAACATGTACAGGGCACCCATATTTCCTCATAAAGTGCCACTAACTGACTACCTGCTAGTTCGGTCATCAAAGGGAAAGCTATCGTTAAGACGGATTGATAAAATTAATGTTGTTGGACAGCAGGAGCCTCTTATTGAGGTATTGTCACCTGGTAGTAAGAATCTTCAGACATATATGATGAATAGGCTGCTGGTGCACATGTGCCGTGAATTTCAAGCTGCAGAGAAACGTCGCTTACCTCCATACATTCGTGTTGATGAGCTGCTGTCACAGTTTCCTTACCTATCAGAAGCTTCTTTTCGCAAGAAAATTAAGGAATATGCTATTTTACAGAAGGGAGCAAACGGACAGTCAATTTTGGTTAAAAAGCGAAATTTTCACATGTGGTCGGAGGATGAATTGAGAAAAATGGTGACGCCAGAGCTTGTTTGTGCTTATGAAAGCATGCAAGCTGGTCTCTACCGTCTAAAACATTTGGGAATTACTGAAACTCATCCTACTAATATATCTTCTGCTGTGAGTCGGCTTCCTGGTGAAGCAATTGCACTGGCTGCCGCATCTCACATTGAGAGGGAGCTGCAAATCACTCCATGGAACCTGAGTAAATTTGTTGCCTGCACAAGCCAGGGAAAGGAAAATATTGAGCGAATGGAAATCACCGGTGTTGGTGATCCATCTGGGCGTGGTTTGGGTTTCAGCTATGCTCGGGCTCCTCCAAAGGCACCAGTGTCAAGTGCAGTGGTGAAGAAGAAAGCAGCTGCTGCCAGGGGTGGTTCCACTGTCACTGGAACAGATGCTGATCTACGCAGATTAAGCATGGAAGCTGCACGAGAGGTTCTTCTTAAGTTCAATGTTCCTGAGGAAGTCATTGCAAAACAAACCAGGTGGCATCGCATTGCTATGATACGCAAACTTTCAAGTGAGCAAGCAGCATCTGGAGTTAAGGTTGACCCAACAACTATCAGTAAATATGCTCGTGGCCAGCGAATGTCCTTTCTTCAGTTACAACAGCAGACCAGGGAGAAGTGCCAGGAGATTTGGGACCGACAAGGTCAAAGCCTTTCAGCTGCGAATGGTGATGAAAATGAGAGTGATTCTGAAGGAAACAGTGATCTGGATTCTTTTGCTGGTGATCTGGAAAATTTACTTGATGCTGAAGAGTGTGAAGAGGGAGAAGAGGGTACCGATGATTTTAAACGTGACAAGGCTGATGGTGTTAAGGGTCTTAAAATGAGAAGACGTCCAACCTTAGCCCAGGCAGAGGAGGAAATAGAAGATGAAGCTGCGGAGGCTGCTGAACTATGCAGATTACTTATGGATGATGATGAAGATGAGAGGAAGAAAAAGAAAAAGACTAAACTTGTGGAGGAAGCAGGAGTAATTTCAAAACTACAGTCAAGATTTGTCTTTGACAACACAGAACAGGTTAAGCAAATAACTAATACTGTGCAACTAGATGGAGCCAATATATTGAAAGAAAATACTGTTACAAATATCAGGGAGGAGGATGGTATTTCTGCTAAAAAAAGCAAATCAGTGAAGGTCAATAAAACTAAGAAGAGTGACCTTTCACCTATTAGTGTGGCGAATAAGAAAATAAAGTTAAATATTGGGGAACCACCAAAGGTATTCAAGGAGAAAAAGCCATCAAGGGAAAGTTTTGTTTGTGGGGCATGTGGTCAGCTTGGGCACATGAGGACAAACAAGAACTGTCCAAAATATGGTGAAGATCTGGAAGCACAACCTGAATCTATAGACATGGAAAAAACCGGTGGAAAATCAAGCTTGTTGGATCCTTCTGGTCAGTCCCAGCAAAAAGCCGTTTCCAAGAAGCTTATTTCAAAAAGCTCATCGAAAATTGCTCTGGTTGAGGCTTCTGAGGGAGAAAAAACTAGTTTGAAGGCAAAAGTTCTTCCAGTGAAGTTCAAATGCAGCTCCACTGAAAAACCTGTTATTGAAGCCACACAAAGCTCTGATAAGCCAGTCACTTCTGACTCAGAAACTGCCAAATCTGCTAAGATTAGTAGAATCTTAATTCCCAAAAAAGTGAAGCCAGATGATATGAAAGCTGAATCTCGTAGGCACGCTATTGCTATACGCCCTCCAGCTGATCCAAGTAGAAGTCAAGTCGATTCTCATAAGCCGTCAATTATAATACGGCCACCTACAGAAACAGATAGGGAGCAACCTCAAAAGAAAATTATTATAAAACGCACAAAGGATGTTATTGACCCAGACCAGTTCAGTCCTGGTGAAAACATGGGATTTGAGCACAGGAAAACAAAAAGAATTGTTGAATTGTCAAATTTTGAGAAGCACAGAAAACAGGAGACCATGTATAGGGCTGAAGCCGCTCTGGCAAAACATAAAGCTAAAGAGGACAGAAGATGGTGGGATGAACAAGAGAAGAGGAGAAAAGAAGAAAGACTTCGAGAGGAACGGGCAAGGAGGCTTCATGAGGAAGAAATGAGGATGCTAAAAGAGCAAGAAAGGTTAGCTGAGTTAAAAAGATACGAAGAAGATATTAGGAGAGAGAGGGAGGAAGAAGAACGGCAAAAAGCAAAGAAGAAGAAGAACAAAAAAGCGGAGTTTAGAGATGAGTATATAGATGACCACAGAACAAGAATTAATAACAGAGTGTTAGAAAGAGAACGAAGTGGAAAAAGAAGATCCGTTGTTGAGTTGGGAAGATATGCAGCTGAATACACACCGCCACCAAAACGGCGGAGAGGTGGAGGGGGGGAGGTTGGTTTGGCAAATATTTTGGAGCGCATTCTCGAGGCACTCAAAGAACGGTATGACCTGTCATACCTTTTTTTGAAACCCGTGTCAAAGAAAGAAGCTCCCGACTACCTGGACGTTATAGAGAGGCCAATGGATCTTTCAAGAATCAGGGATAGGGTGAGGAATATGGAGTACAAAAGCCGGGAAGATTTTAGACATGATGTGTGGCAGATTGCGTATAATGCCCACAAATATAACGACGGGAGAAACCCAGGAATTCCTCCTCTTGCGGATCAGCTTTTAGAGTTGTGTGATTATTTGTTGAATGAGAATGACGATAGCCTAACTGAAGCTGAAGCTGGTATTGAAACTAGGGATTTCTAG 5658 0.4224 MEYDSDSPSQDGRDEDDDEEYEEAGKGNRLLGFMFGNVDNSGDLDVDYLDEDAKEHLSALADKLGPSLTDIDLSGKSPQTPPDIVEQDYGEKAEDAVDYEDIDEEYDGPETEAANEEEHLLPKKDFFSAEASLEALKSRSSVFDDENYDEESEKEEDLVNNTSEINNISSTAELVESLIDASKGEKSLELESHDGSQQSEELDTDSQKLQEEGPEVLKGSTPLPVLCVEDGMVILRFSEIFGIHEPLRKGGRREQRPSIPRERYKSFNLSDIVEEDEETFFRGSSYSLLLNKQACVVQNGISESSNADSDLSKFGFLHGVASMSVKDGPQQKHSCLSGEPMKHDCSGLSWEGHSLFCSDFYPLDQQDWEDEIIWGNSPAVSDNNLESSEISGPTLGPLGCDGEIESGMQNIQLELPKELEERNHGVFMCSSPVSLEPFGSRDSSGAKANSLSKSLFHPQLLRLESRPEVDASNPADDRRENISEEHNQNGLAKHCTKLALQNQDMMEGSWLDNIIWEEVNRPIVKPKLIFDLQDDQMHFEVLDSKDGRHLRLHAGAMILTRPLRSSSGDSSELPGHGNQYGWRSIANDKHYSNRKTSQQLKSNSKKRSAHGVKVFHSQPALKLQTMKLKLSNKDIANFHRPRASWYPHDNEMAVKEQGKLPTQGPMKIIMKSLGGKGSKLHVDAEETLSSIKAKASKKLDFKPLETVKIFYLGKELEDQKSLAAQNVRPNSLLHLVRTKIHLWPRAQRLPGENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGARLCTYYQKCSPDDQGGSLLRNTNSSLGHVISLDPADKSPFLGDLKPGCSQSSLETNMYRAPIFPHKVPLTDYLLVRSSKGKLSLRRIDKINVVGQQEPLIEVLSPGSKNLQTYMMNRLLVHMCREFQAAEKRRLPPYIRVDELLSQFPYLSEASFRKKIKEYAILQKGANGQSILVKKRNFHMWSEDELRKMVTPELVCAYESMQAGLYRLKHLGITETHPTNISSAVSRLPGEAIALAAASHIERELQITPWNLSNXFVACTSQGKENIERMEITGVGDPSGRGLGFSYARAPPKAPVSSAVVKKKAAAARGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEVIAKQTRWHRIAMIRKLSSEQAASGVKVDPTTISKYARGQRMSFLQLQQQTREKCQEIWDRQGQSLSAANGDENESDSEGNSDLDSFAGDLENLLDAEECEEGEEGTDDFKRDKADGVKGLKMRRRPTLAQAEEEIEDEAAEAAELCRLLMDDDEDERKKKKKTKLVEEAGVISKLQSRFVFDNTEQVKQITNTVQLDGANILKENTVTNIREEDGISAKKSKSVKVNKTKKSDLSPISVANKKIKLNIGEPPKVFKEKKPSRESFVCGACGQLGHMRTNKNCPKYGEDLEAQPESIDMEKTGGKSSLLDPSGQSQQKAVSKKLISKSSSKIALVEASEGEKTSLKAKVLPVKFKCSSTEKPVIEATQSSDKPVTSDSETAKSAKISRILIPKKVKPDDMKAESRRHAIAIRPPADPSRSQVDSHKPSIIIRPPTETDREQPQKKIIIKRTKDVIDPDQFSPGENMGFEHRKTKRIVELSNFEKHRKQETMYRAEAALAKHKAKEDRRWWDEQEKRRKEERLREERARRLHEEEMRMLKEQERLAELKRYEEDIRREREEEERQKAKKKKNKKAEFRDEYIDDHRTRINNRVLERERSGKRRSVVELGRYAAEYTPPPKRRRGGGGEVGLANILERILEALKERYDLSYLFLKPVSKKEAPDYLDVIERPMDLSRIRDRVRNMEYKSREDFRHDVWQIAYNAHKYNDGRNPGIPPLADQLLELCDYLLNENDDSLTEAEAGIETRDF 1886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g2039 1886 CDD Ubl_TAFs_like 666 737 - -
Prci5g2039 1886 Gene3D - 21 68 IPR036741 -
Prci5g2039 1886 SUPERFAMILY Bromodomain 1754 1875 IPR036427 GO:0005515
Prci5g2039 1886 CDD Bromodomain 1772 1867 - -
Prci5g2039 1886 MobiDBLite consensus disorder prediction 138 159 - -
Prci5g2039 1886 Pfam TATA box-binding protein binding 17 61 IPR009067 -
Prci5g2039 1886 Pfam Zinc knuckle 1407 1435 IPR041670 -
Prci5g2039 1886 MobiDBLite consensus disorder prediction 1530 1551 - -
Prci5g2039 1886 MobiDBLite consensus disorder prediction 1506 1522 - -
Prci5g2039 1886 MobiDBLite consensus disorder prediction 1576 1596 - -
Prci5g2039 1886 MobiDBLite consensus disorder prediction 1506 1611 - -
Prci5g2039 1886 MobiDBLite consensus disorder prediction 1234 1253 - -
Prci5g2039 1886 MobiDBLite consensus disorder prediction 469 490 - -
Prci5g2039 1886 Pfam Protein of unknown function (DUF3591) 585 1152 IPR022591 -
Prci5g2039 1886 MobiDBLite consensus disorder prediction 1199 1214 - -
Prci5g2039 1886 MobiDBLite consensus disorder prediction 185 212 - -
Prci5g2039 1886 Gene3D - 648 738 - -
Prci5g2039 1886 PRINTS Bromodomain signature 1799 1815 IPR001487 GO:0005515
Prci5g2039 1886 PRINTS Bromodomain signature 1785 1798 IPR001487 GO:0005515
Prci5g2039 1886 PRINTS Bromodomain signature 1833 1852 IPR001487 GO:0005515
Prci5g2039 1886 PRINTS Bromodomain signature 1815 1833 IPR001487 GO:0005515
Prci5g2039 1886 MobiDBLite consensus disorder prediction 1 28 - -
Prci5g2039 1886 ProSitePatterns Bromodomain signature. 1787 1844 IPR018359 -
Prci5g2039 1886 MobiDBLite consensus disorder prediction 463 490 - -
Prci5g2039 1886 Pfam Ubiquitin family 670 738 IPR000626 GO:0005515
Prci5g2039 1886 SUPERFAMILY TAF(II)230 TBP-binding fragment 24 62 IPR036741 -
Prci5g2039 1886 Coils Coil 1268 1288 - -
Prci5g2039 1886 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 13 1885 IPR040240 GO:0001091|GO:0004402|GO:0005669|GO:0006366|GO:0017025
Prci5g2039 1886 MobiDBLite consensus disorder prediction 563 608 - -
Prci5g2039 1886 MobiDBLite consensus disorder prediction 1 22 - -
Prci5g2039 1886 MobiDBLite consensus disorder prediction 1197 1227 - -
Prci5g2039 1886 Coils Coil 1660 1718 - -
Prci5g2039 1886 MobiDBLite consensus disorder prediction 93 112 - -
Prci5g2039 1886 MobiDBLite consensus disorder prediction 53 126 - -
Prci5g2039 1886 FunFam Transcription initiation factor TFIID subunit 1 648 738 - -
Prci5g2039 1886 MobiDBLite consensus disorder prediction 591 605 - -
Prci5g2039 1886 Gene3D - 1759 1885 IPR036427 GO:0005515
Prci5g2039 1886 ProSiteProfiles Ubiquitin domain profile. 666 736 IPR000626 GO:0005515
Prci5g2039 1886 MobiDBLite consensus disorder prediction 185 216 - -
Prci5g2039 1886 MobiDBLite consensus disorder prediction 1424 1461 - -
Prci5g2039 1886 SMART bromo_6 1762 1872 IPR001487 GO:0005515
Prci5g2039 1886 SMART ubq_7 666 738 IPR000626 GO:0005515
Prci5g2039 1886 SUPERFAMILY Ubiquitin-like 636 736 IPR029071 -
Prci5g2039 1886 ProSiteProfiles Bromodomain profile. 1782 1852 IPR001487 GO:0005515
Prci5g2039 1886 Pfam Bromodomain 1773 1848 IPR001487 GO:0005515
Prci5g2039 1886 MobiDBLite consensus disorder prediction 1446 1461 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g2039 666 736 Cytoplasmic Ribosomal Protein Gene Family AT3G62250 38.028 6.56e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g2039 K03125 - gmx:100780733 2704.47