Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g2027 ATGATGGAGAAGAGCGAGAATGAGAGGTCGTCAGGTGATCGAGAGTTCTATGCAAATGGAAATCACATGAATACTGCAGAAGTTGAATCCAGCCTCGACCAAGGAAATGTCGAAGCCGCTGAATCTGCATTGAAAGAGGGCTTATCTATCACTTCTGAGGAAGCAAGAACTCTTATTGGGAAGCTAGAGTATCAAAGAGGTAATTTTGCAAGTGCTCTTCGTGTGTTTGACGGGGTTGATCTCCAAGCTGCCCTTCAGCAATTACAATCTTTGGTTTCTGATAAATCATCGGCCAAGAAAGCTCGCCCTCGTGCTGAATCACCTACCTTAATCCGTAGGCATGCCGCTAGTTTGATGCTTGAATCCTTCTACTTCAAAACAAAAACTCTACGAAAGCAGGGGAAAATAACTGAAGCTACCACGGAATGCAAAAGTGTGCTTGAGGGTATTGAGAAGACATTCAGTCAGGGTGTATCTGATATTCAATTGGACAACACATTGCAGGAAGTAGTCAGTGGCATTGTAGGACTTCTTCCAGATCTTACAAAACAAGCAGGTAGCTATCAAGAGGCATTGTCTGCTTATAGGCGTGCTCTTCAACTTCTAAGTCAATGGAACTTTGATACTGATGGCTGTGCTAGAGTTCAGAAAGGACTTGCTATGCTTTTGCTGCATGGTGGGTTCGAGGCTAGCCCACCCAAGGCGACTGATCAGTGCGAGGGGTTTTATGTACCAAAAAACAATCTGGAAGAGGCAATTCTGCTTCTAATGCTTGCTGTAAGGAGACTTTGCATTGACAAGTCCAAATGGGATCATTCAGTGATGGAGCACCTGACTTTTGCACTTTCTGTCTGTGGCCAAACTTGTGTTCTAGCAAAGCAGCTTGAAGAGTTAGTGCCTGGATTGTATCATCGTATTGATCGTTGGAATCTTCTAGCTTTATGCCTCTATGGAGCAGGACAAAACGAAAATGCTCTGGATCTACTAAGGAAATCTTTGCACAAACATGAGAGACCAAATGATATTGAATCATTGTTAGTGGCTGCCAGGATCTGCAGTGAGAATCTTCATCTTGCTGCTGAGGGAGTGGGGTATGCACAGAGGGCAATCGGCAATGCCAAGGGCATAAACGAGCATCTAAAAGGTGTGAGTCTTAGGATGCTGGGACTTTGTCTGGGAAAGCAAGCTAAGGTTGCTTCCTCGGACTTTCAAAGGTCTAATCTTCAGTCCAAAGCTCTGAAATCATTAGAAGGGGCAATGGGATTTGAGTGTAACAATTCTGATCTGATTTTTGAGCTTGGAGTAAAGTACGCAGAACACAGAAATTTGACAAATTCTTTGCGCTATGCAAAGCAGTTCTTTGATGAAACAGGAGGATCTATGTTGGAAGGTTGGAGATTGATTGCTCTGATTTTGTCTGCTCAACAACGATTCACGGCGGCCGAAGTGGTGATAAATGCTGCTTTAGATGAGACTGCAAGATGGGAGCAAGGGCCACTTCTTAGACTGAAAGCAAAGCTCAAGATATCCCAATCACAACCCATGGATGCTATTGAAACTTATAGATACCTCCTTGCATTGATTCAAGCTCAAAAGAATTCCTTTGGGCCTATGAAAATAAATACACAGGTCCAAGATGATGTGAAGGAAATTGATGTTTGGCATGGTCTGGCAAATTTATATGCAAGCCTTTCTCATTGGAAGGATGCTGAAGTTTGTTTGCAAAAGGCCAGAGAATTGAAGGAGTACTCAGCAGAGACAGTGCACATTGAAGGTCTTTTGTGCGAAGGACGTGGACAAAATCAAGAAGCTGTTTCTGCTATCACGACAGGTCTCCTGTTTGGACCATGCTATGTTCCAAGCAAGATCCAGATGGGTGTTTTGCTGCTGAAATTGGATTCAAAGTCAAAACCTTTGCCTTTAGCCAGAAGCTTACTTTCTGATGCACTTCGATTAGAACCCACTAACCGTACAGCTTGGTTTCACTTGGGAAAAGTTCACAAGTATGATGGCCGAATAGGTGATGCTGCTGACTGCTTCCAGGCAGCTTCCATGCTTGAAGAATCTGATCCTGTTGAAAGTTTCAGCACTTTGCTTTGA 2100 0.4362 MMEKSENERSSGDREFYANGNHMNTAEVESSLDQGNVEAAESALKEGLSITSEEARTLIGKLEYQRGNFASALRVFDGVDLQAALQQLQSLVSDKSSAKKARPRAESPTLIRRHAASLMLESFYFKTKTLRKQGKITEATTECKSVLEGIEKTFSQGVSDIQLDNTLQEVVSGIVGLLPDLTKQAGSYQEALSAYRRALQLLSQWNFDTDGCARVQKGLAMLLLHGGFEASPPKATDQCEGFYVPKNNLEEAILLLMLAVRRLCIDKSKWDHSVMEHLTFALSVCGQTCVLAKQLEELVPGLYHRIDRWNLLALCLYGAGQNENALDLLRKSLHKHERPNDIESLLVAARICSENLHLAAEGVGYAQRAIGNAKGINEHLKGVSLRMLGLCLGKQAKVASSDFQRSNLQSKALKSLEGAMGFECNNSDLIFELGVKYAEHRNLTNSLRYAKQFFDETGGSMLEGWRLIALILSAQQRFTAAEVVINAALDETARWEQGPLLRLKAKLKISQSQPMDAIETYRYLLALIQAQKNSFGPMKINTQVQDDVKEIDVWHGLANLYASLSHWKDAEVCLQKARELKEYSAETVHIEGLLCEGRGQNQEAVSAITTGLLFGPCYVPSKIQMGVLLLKLDSKSKPLPLARSLLSDALRLEPTNRTAWFHLGKVHKYDGRIGDAADCFQAASMLEESDPVESFSTLL 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g2027 699 Gene3D Tetratricopeptide repeat domain 396 693 IPR011990 GO:0005515
Prci5g2027 699 SUPERFAMILY TPR-like 501 687 IPR011990 GO:0005515
Prci5g2027 699 Gene3D Tetratricopeptide repeat domain 22 261 IPR011990 GO:0005515
Prci5g2027 699 MobiDBLite consensus disorder prediction 1 15 - -
Prci5g2027 699 SUPERFAMILY TPR-like 184 489 IPR011990 GO:0005515
Prci5g2027 699 PANTHER PROTEIN NPG1 6 696 IPR043376 -
Prci5g2027 699 MobiDBLite consensus disorder prediction 23 37 - -
Prci5g2027 699 SMART tpr_5 172 205 IPR019734 GO:0005515
Prci5g2027 699 SMART tpr_5 657 690 IPR019734 GO:0005515
Prci5g2027 699 SMART tpr_5 551 584 IPR019734 GO:0005515
Prci5g2027 699 SMART tpr_5 306 339 IPR019734 GO:0005515
Prci5g2027 699 SMART tpr_5 462 495 IPR019734 GO:0005515
Prci5g2027 699 MobiDBLite consensus disorder prediction 1 39 - -
Prci5g2027 699 SUPERFAMILY TPR-like 184 338 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g2027 Prci-Chr5 37876607 37880844 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g2027 3 699 Calmodulin-binding Proteins AT2G43040 63.143 0.0 872
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g2027 K21843 - gmx:100814609 913.294