Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g2011 ATGATAAAGGATATGGCACTGAAGTTTTCAGGTGCCTATAAGCAATGCAAACCGTGCACAGGATCCAGTAGTCATAAGAAAGAGCAGAGACCTTATCCAGATTTTGATACCATCTCTGAAGGAGTTCCATACCCTTATATTGGAGGGGCAAGCTCAAGTTCAACCCCTGCATGGGACTTTATCGGCTCCCATTATCCGGCTGGTAGATCGGACCCGAGATTTACTGGGTCATTTGGTGGCGGCCGAACCCCAAAAGGACGCGAATCGGCTTCTGTCTGTGATGTAGTGCTGGAGAAAGAGGATGAGCCCAAGGAGTGGATGGCACAGGTGGAGCCAGGGGTTCACATTACATTTGTGTCTCTTCCAAATGGGGGAAATGATCTCAAAAGAATTCGCTTCAGCCGAGAGATGTTCGACAAATGGCAAGCTCAAAGGTGGTGGGGTGAGAATTACGATCGAATCATGGAGCTCTATAACGTCCAGAGATTCAATCGACAAATCAACACTCCTACAAGATCTGAAGATGAGCAAAGAGATTCTTCATACTCGAGACTGGGATCTGCAAGAGACAGCCCCATGGGGTCATCATTAAACAAAGAATGGACGCCAAGGAACTATCCTAAAACCCCAGGAAACAGAGGGTACTTTCCATCTGAATCTTCGGATCAAGGTGGAGGACCCCAATTCCACGGAGGGTCTTCATTTGAAGCATCGAGGACAACCACCTCTTCTAGAGATGAACCTTCTGTTAGCAATGGCAGTGACATGGAGACAGAATGGGTAGAGCAAGATGAGCCTGGAGTGTACATTACTATCCGACAGTTACTCGACGGCTCAAGGGAGCTTCGACGTGTCAGATTCAGCCGCGAAAGATTCGGGGAGGTACATGCCAAGAATTGGTGGGAGGAGAACAGGGAAAGAATACAAGCTCAATACCTTTGA 942 0.4788 MIKDMALKFSGAYKQCKPCTGSSSHKKEQRPYPDFDTISEGVPYPYIGGASSSSTPAWDFIGSHYPAGRSDPRFTGSFGGGRTPKGRESASVCDVVLEKEDEPKEWMAQVEPGVHITFVSLPNGGNDLKRIRFSREMFDKWQAQRWWGENYDRIMELYNVQRFNRQINTPTRSEDEQRDSSYSRLGSARDSPMGSSLNKEWTPRNYPKTPGNRGYFPSESSDQGGGPQFHGGSSFEASRTTTSSRDEPSVSNGSDMETEWVEQDEPGVYITIRQLLDGSRELRRVRFSRERFGEVHAKNWWEENRERIQAQYL 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g2011 313 ProSiteProfiles BRX domain profile. 258 313 IPR013591 -
Prci5g2011 313 MobiDBLite consensus disorder prediction 168 262 - -
Prci5g2011 313 MobiDBLite consensus disorder prediction 184 205 - -
Prci5g2011 313 Pfam Transcription factor BRX N-terminal domain 2 19 IPR027988 -
Prci5g2011 313 PANTHER PROTEIN BREVIS RADIX-LIKE 1 2 313 IPR044532 -
Prci5g2011 313 MobiDBLite consensus disorder prediction 169 183 - -
Prci5g2011 313 MobiDBLite consensus disorder prediction 214 257 - -
Prci5g2011 313 Pfam Transcription factor regulating root and shoot growth via Pin3 257 312 IPR013591 -
Prci5g2011 313 Pfam Transcription factor regulating root and shoot growth via Pin3 104 158 IPR013591 -
Prci5g2011 313 ProSiteProfiles BRX domain profile. 104 159 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g2011 Prci-Chr5 37754305 37757358 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g2011 2 313 Major Intrinsic Protein MIP AT1G31880 68.025 1.79e-145 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g2011 - - gmx:100819016 538.495