Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g2007 ATGTTTACATGCATAGCGTGTACAAAGCAATTGGCGGAGGAGAGGGAAGTTGGAGGAGGAACCCGTGAGAGTGGCACGCCGAGTACAAAAGAAGCCGTCAAAAGCCTGACGACGCAGATAAAGGATATGGCACTGAAGTTTTCAGGTGCCTATAAGCAATGCAAACCGTGCACAGGATCCAGTAGTCATAAGAAAGAGCAGAGACCTTATCCAGATTTTGATACCATCTCTGAAGGAGTTCCATACCCTTATATTGGAGGGGCAAGCTCAAGTTCAACCCCTGCATGGGACTTTATCGGCTCCCATTATCCGGCTGGTAGATCGGACCCGAGATTTACTGGGTCATTTGGTGGCGGCCGAACCCCAAAAGGACGCGAATCGGCTTCTGTCTGTGATGTAGTGCTGGAGAAAGAGGATGAGCCCAAGGAGTGGATGGCACAGGTGGAGCCAGGGGTTCACATTACATTTGTGTCTCTTCCAAATGGGGGAAATGATCTCAAAAGAATTCGCTTCAGCCGAGAGATGTTCGACAAATGGCAAGCTCAAAGGTGGTGGGGTGAGAATTACGATCGAATCATGGAGCTCTATAACGTCCAGAGATTCAATCGACAAATCAACACTCCTACAAGATCTGAAGATGAGCAAAGAGATTCTTCATACTCGAGACTGGGATCTGCAAGAGACAGCCCCATGGGGTCATCATTAAACAAAGAATGGACGCCAAGGAACTATCCTAAAACCCCAGGAAACAGAGGGTACTTTCCATCTGAATCTTCGGATCAAGGTGGAGGACCCCAATTCCACGGAGGGTCTTCATTTGAAGCATCGAGGACAACCACCTCTTCTAGAGATGAACCTTCTGTTAGCAATGGCAGTGACATGGAGACAGAATGGGTAGAGCAAGATGAGCCTGGAGTGTACATTACTATCCGACAGTTACTCGACGGCTCAAGGGAGCTTCGACGTGTCAGATTCAGCCGCGAAAGATTCGGGGAGGTACATGCCAAGAATTGGTGGGAGGAGAACAGGGAAAGAATACAAGCTCAATACCTTTGA 1056 0.4848 MFTCIACTKQLAEEREVGGGTRESGTPSTKEAVKSLTTQIKDMALKFSGAYKQCKPCTGSSSHKKEQRPYPDFDTISEGVPYPYIGGASSSSTPAWDFIGSHYPAGRSDPRFTGSFGGGRTPKGRESASVCDVVLEKEDEPKEWMAQVEPGVHITFVSLPNGGNDLKRIRFSREMFDKWQAQRWWGENYDRIMELYNVQRFNRQINTPTRSEDEQRDSSYSRLGSARDSPMGSSLNKEWTPRNYPKTPGNRGYFPSESSDQGGGPQFHGGSSFEASRTTTSSRDEPSVSNGSDMETEWVEQDEPGVYITIRQLLDGSRELRRVRFSRERFGEVHAKNWWEENRERIQAQYL 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g2007 351 MobiDBLite consensus disorder prediction 222 243 - -
Prci5g2007 351 Pfam Transcription factor BRX N-terminal domain 24 57 IPR027988 -
Prci5g2007 351 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 351 IPR044532 -
Prci5g2007 351 MobiDBLite consensus disorder prediction 206 300 - -
Prci5g2007 351 MobiDBLite consensus disorder prediction 14 33 - -
Prci5g2007 351 ProSiteProfiles BRX domain profile. 296 351 IPR013591 -
Prci5g2007 351 MobiDBLite consensus disorder prediction 207 221 - -
Prci5g2007 351 ProSiteProfiles BRX domain profile. 142 197 IPR013591 -
Prci5g2007 351 MobiDBLite consensus disorder prediction 252 295 - -
Prci5g2007 351 MobiDBLite consensus disorder prediction 52 72 - -
Prci5g2007 351 Pfam Transcription factor regulating root and shoot growth via Pin3 295 350 IPR013591 -
Prci5g2007 351 Pfam Transcription factor regulating root and shoot growth via Pin3 142 196 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g2007 Prci-Chr5 37750820 37757358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g2007 1 351 Major Intrinsic Protein MIP AT1G31880 67.598 6.51e-162 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g2007 - - gmx:100819016 593.193