Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1999 ATGAACTCTCCGCCGATGTGGACGGCGGTCCAGCCACCGTTCACGGTGGCGCAATGGCAGGAGCTTGAACACCAAGCTCTCATCTTTAAGTACCTCAAGGCTGGACTGGCCGTCCCCCTCGACCTCCTCGTTCCTATTCGCAAGAGTCTCGAATTGATGCCGCCAAAGCTCGTTCATCACCCGTCTTTGGGTTATTGCTCGTATTACGGGAAGAAGATCGACCCAGAGCCGGGCAGGTGTCGAAGAACGGATGGGAAGAAGTGGAGATGCTCGAGAGATGCGCATCCGGACTCCAAGTACTGTGAGCGGCACATGATACGCCGTCGTTACCGTTCAAGAAAGCCTGTGGAATCGCAACAAGCTGCTTCTCAGTCTTCGTCCAGTTCTGCATCGGACGTTGCTGCTTCTGGGAGCAGAAGTGGCTCTGGAAGCTTCCAGAGCTTGCCCTTGCACGGAAATGGTGCTCGTGAGGATTTGAACCTTGGAAACAACTTATCACAGCAGATACAGTCTCTTCCCGGTGAGATTAGCAGGAAAGATTGCAGGTTCGGGCTGAATTCTGAGGCAGAGGAGCACAACTTTTTGCAGAAAGGCTTGGGAAGCACAAGCTATCTTGGTTTTGACTCTACCTCGGACACCATGTGGTCTCATATCTCACAAGTTCCCTCACAACTTGTCTTGGAGTCAAGAAATAGTTCTACTATTGTTAGCAGCTGCTTCCAGCTGGGGACGATGCGGGATGCTGAGCCATTGAACATCAATGCTGCAAGATCAAAGCAACATTTTTATGGTGATCAGCTAAGTTTGGCAGGGTGTTTGAAACAGGAAAATCAGTCCCCGCTGACTTTCTCAACCGACTGGCTCTGGAAGGACTCAAGCTCCCCCTCTGTTGAGTATAGACCCAATAAGGATTCTAGCTGTAACCCTGATAGTATGAATCCCTTTCAGTGA 951 0.5089 MNSPPMWTAVQPPFTVAQWQELEHQALIFKYLKAGLAVPLDLLVPIRKSLELMPPKLVHHPSLGYCSYYGKKIDPEPGRCRRTDGKKWRCSRDAHPDSKYCERHMIRRRYRSRKPVESQQAASQSSSSSASDVAASGSRSGSGSFQSLPLHGNGAREDLNLGNNLSQQIQSLPGEISRKDCRFGLNSEAEEHNFLQKGLGSTSYLGFDSTSDTMWSHISQVPSQLVLESRNSSTIVSSCFQLGTMRDAEPLNINAARSKQHFYGDQLSLAGCLKQENQSPLTFSTDWLWKDSSSPSVEYRPNKDSSCNPDSMNPFQ 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1999 316 ProSiteProfiles QLQ domain profile. 13 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
Prci5g1999 316 PANTHER GROWTH-REGULATING FACTOR 5 13 299 IPR031137 GO:0005634|GO:0006351|GO:0032502
Prci5g1999 316 MobiDBLite consensus disorder prediction 293 316 - -
Prci5g1999 316 MobiDBLite consensus disorder prediction 111 151 - -
Prci5g1999 316 ProSiteProfiles WRC domain profile. 74 118 IPR014977 -
Prci5g1999 316 MobiDBLite consensus disorder prediction 116 149 - -
Prci5g1999 316 SMART QLQ_2 12 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
Prci5g1999 316 Pfam QLQ 13 47 IPR014978 GO:0005524|GO:0005634|GO:0006355
Prci5g1999 316 Pfam WRC 75 117 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1999 Prci-Chr5 37711127 37714773 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1999 8 120 GRF Transcription Factor Family AT3G13960 58.120 4.62e-41 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Prci5g1999 WRC 1.2e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1999 - - pcin:129310568 614.764