Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1989 ATGGAGAGAGGTTATGAAGGAGGAGGGAATTTTGGGTTTGAGAATGCGGTGGTGATGACCAGAGACCCAAAGCCAAGGCTCAGATGGACGGCTGATCTTCACGATCGATTTGTCGATGCCGTCACCAAGCTTGGTGGCCCCGACAAAGCGACTCCCAAGTCTGTGTTGAGGCTGATGGGCTTGAAAGGCTTAACTTTGTATCATTTGAAGAGTCATTTGCAGAAATATAGACTTGGACAGCAGGCACGGAAGCAAAACAGTGAGGAACAACACAAAGAGAATAAAAATAATAGAGGTGCATATGTACATTTTAGTGATCGTTCTTCGGGGCCTAACACCAATTACAGAGGCAATAACCAAACAGAGGAAATCCCATTAGCAGAGGCACTGAGGCGTGGGATCGAAGTTCAAAAGCAATTGGAAGATCAGCTCGAGGTACAGAAGAAATTGCAGATGAGAATAGAGGCTCAAGGGAAGTACTTGCAAGCCATGCTTGAGAAAGCACAGAAGAGCCTTTCCCTGGACATGAATGGACCACAAAACCTGGAAGCAGCTAGAGCTCAATTGACAGACTTCAACTCTGCTCTGTCCAATTTCATGGAGAACATGAACAGAGACAACAAAGAAAACATCATGGGAATGAATGATTTCTACAAGAAGGCCCACAGTTCATCGGCTTTTGGAATTTACCCGGAAACAGAGGGAGAAGATCTCAAGGACCGGAAGCCTAAGGTTGAAGAGGGTTCAATACAGTTTGACTTAAACATCAAAGGTAGCTATGACTTTGTATCAGCAGGTGCAGCTGAAATGGATTCCAAGGTGCTTTCATACAGAGTGTAA 840 0.45 MERGYEGGGNFGFENAVVMTRDPKPRLRWTADLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQKYRLGQQARKQNSEEQHKENKNNRGAYVHFSDRSSGPNTNYRGNNQTEEIPLAEALRRGIEVQKQLEDQLEVQKKLQMRIEAQGKYLQAMLEKAQKSLSLDMNGPQNLEAARAQLTDFNSALSNFMENMNRDNKENIMGMNDFYKKAHSSSAFGIYPETEGEDLKDRKPKVEEGSIQFDLNIKGSYDFVSAGAAEMDSKVLSYRV 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1989 279 Coils Coil 137 157 - -
Prci5g1989 279 Coils Coil 182 202 - -
Prci5g1989 279 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 15 211 IPR044848 GO:0003700
Prci5g1989 279 MobiDBLite consensus disorder prediction 101 119 - -
Prci5g1989 279 MobiDBLite consensus disorder prediction 78 119 - -
Prci5g1989 279 Pfam Myb-like DNA-binding domain 27 77 IPR001005 -
Prci5g1989 279 MobiDBLite consensus disorder prediction 82 100 - -
Prci5g1989 279 SUPERFAMILY Homeodomain-like 24 81 IPR009057 -
Prci5g1989 279 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 81 IPR017930 -
Prci5g1989 279 Pfam MYB-CC type transfactor, LHEQLE motif 125 171 IPR025756 -
Prci5g1989 279 FunFam Myb family transcription factor 23 81 - -
Prci5g1989 279 NCBIfam myb-like DNA-binding domain, SHAQKYF class 24 79 IPR006447 GO:0003677
Prci5g1989 279 Gene3D - 23 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1989 Prci-Chr5 37645112 37649470 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1989 5 192 G2-like Transcription Factor Family AT4G13640 50.259 2.75e-61 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Prci5g1989 Myb_DNA-binding 2.2e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1989 - - gmx:100819756 374.015