Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1958 ATGGTTGGCAGCAAGGCGGATAAAACCTCAAATGACAAGGAACCCAAGACTCCTGCTACGTCACAGGAGCAGGCTTCGACCACCAGCACTGGAGCAATAAATCCTGACTGGTCTAGCTTTCAGACTTATTCTCCTATACCTCCGCATGGATACTTGGCATCAAGCCCGCAAGCCCATCCATATATGTGGGGCGTTCAGCATATTATGCCTGCCTATGGTACTCCACCACATCCTTATGTTGCAATGTATCCCCCTGGTGGCATATACGCACATCCGTCAATGCCTCCGGGATCTTATCCTTTTAGTCCTTTTGCCATGCCTACTTCTAATGGTATTGCTGAGGCTTCAGGAAACACACCTGGCAGCATAGAAGGTGATGGTAAGCCTCCTGAGGTGAAGGAAAAATTGCCGATAAAAAGATCAAAAGGAAGTTTGGGCAGTTTGAATATGATCACAGGGAAGAATAATGAACTTAGTAAAAACCCAGGGACGTCTGCTAATGGAATTCATTCAAAAAGTGGTGAGAGTGCAAGCGAAGATACAAGTGAAGGAAGCGGAGCAAATTCTCAGGATGACTCTGAGTTGAAATCAGGGGGCAGGCAGAATTCTTTGGAAGCTGAACCACCTCAAAATGGAAGTTCAGTGCACCCTCCTCAAAATGGGGGAGTTAATACTCATCACGGGGTGGTTAATCAAGTTATGCCTATCTCTGCTGCTGGCGCTCCTGTAGCCGTCCCTGGTCCCACAACAAACCTAAATATTGGAATGGATTATTGGGGAGCACCAACTTCTTCTGCAGTTCCTGTGCTGCATGGAAAGGTTCCTTCTAATGCAGTTGCTGGGGGAATGGTTGCTGCTGGATCACGGGATGGTGTTCAGTCACAACATTGGCTTCAGGATGAACGAGAGCTTAAAAGACAAAGACGGAAGCAGTCTAATAGAGAATCTGCTCGCAGATCCAGGTTGCGCAAGCAGGCTGAGTGCGATGAACTAGCACAACGTGCTGAGGCCTTGAAAGAAGAAAATGATTCTCTCCGGTCGGAAGTGAGTCGAATTAAGAGTGAGTACGAGCAGTTGCTCTCAGAGAATGCTGCACTGAAGGAGAGACTGGGCGAACTTCCTGAGAAAGAAGATTTTAGGTCCGGCCAGAATGATGAAAATGTTAGTAACGAAGCTCAACAGACTGGGCAGGAGGAAGGCTGTGAAGGGTGA 1212 0.4769 MVGSKADKTSNDKEPKTPATSQEQASTTSTGAINPDWSSFQTYSPIPPHGYLASSPQAHPYMWGVQHIMPAYGTPPHPYVAMYPPGGIYAHPSMPPGSYPFSPFAMPTSNGIAEASGNTPGSIEGDGKPPEVKEKLPIKRSKGSLGSLNMITGKNNELSKNPGTSANGIHSKSGESASEDTSEGSGANSQDDSELKSGGRQNSLEAEPPQNGSSVHPPQNGGVNTHHGVVNQVMPISAAGAPVAVPGPTTNLNIGMDYWGAPTSSAVPVLHGKVPSNAVAGGMVAAGSRDGVQSQHWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENDSLRSEVSRIKSEYEQLLSENAALKERLGELPEKEDFRSGQNDENVSNEAQQTGQEEGCEG 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1958 403 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 308 323 IPR004827 GO:0003700|GO:0006355
Prci5g1958 403 MobiDBLite consensus disorder prediction 367 403 - -
Prci5g1958 403 CDD bZIP_plant_GBF1 306 356 IPR045314 GO:0003700|GO:0006355
Prci5g1958 403 MobiDBLite consensus disorder prediction 145 227 - -
Prci5g1958 403 MobiDBLite consensus disorder prediction 289 327 - -
Prci5g1958 403 Gene3D - 304 358 - -
Prci5g1958 403 Pfam G-box binding protein MFMR 7 95 IPR012900 -
Prci5g1958 403 Pfam bZIP transcription factor 301 363 IPR004827 GO:0003700|GO:0006355
Prci5g1958 403 MobiDBLite consensus disorder prediction 295 310 - -
Prci5g1958 403 MobiDBLite consensus disorder prediction 111 227 - -
Prci5g1958 403 MobiDBLite consensus disorder prediction 1 41 - -
Prci5g1958 403 MobiDBLite consensus disorder prediction 368 384 - -
Prci5g1958 403 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 303 366 IPR004827 GO:0003700|GO:0006355
Prci5g1958 403 SMART brlzneu 301 365 IPR004827 GO:0003700|GO:0006355
Prci5g1958 403 MobiDBLite consensus disorder prediction 15 41 - -
Prci5g1958 403 Coils Coil 321 369 - -
Prci5g1958 403 PANTHER G-BOX-BINDING FACTOR 3-RELATED 15 395 IPR044827 GO:0003700|GO:0006355|GO:0043565
Prci5g1958 403 SUPERFAMILY Leucine zipper domain 304 360 IPR046347 GO:0003700|GO:0006355
Prci5g1958 403 Pfam Disordered region downstream of MFMR 134 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1958 Prci-Chr5 37450878 37459041 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1958 1 399 bZIP Transcription Factor Family AT2G35530 61.220 1.62e-164 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci5g1958 MFMR_assoc 5.8e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1958 K09060 - gmx:778122 627.861