Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1957 ATGGTTGGCAGCAAGGCGGATAAAACCTCAAATGACAAGGAACCCAAGACTCCTGCTACGTCACAGGCTTCGACCACCAGCACTGGAGCAATAAATCCTGACTGGTCTAGCTTTCAGACTTATTCTCCTATACCTCCGCATGGATACTTGGCATCAAGCCCGCAAGCCCATCCATATATGTGGGGCGTTCAGCATATTATGCCTGCCTATGGTACTCCACCACATCCTTATGTTGCAATGTATCCCCCTGGTGGCATATACGCACATCCGTCAATGCCTCCGGGATCTTATCCTTTTAGTCCTTTTGCCATGCCTACTTCTAATGGTATTGCTGAGGCTTCAGGAAACACACCTGGCAGCATAGAAGGTGATGGTAAGCCTCCTGAGGTGAAGGAAAAATTGCCGATAAAAAGATCAAAAGGAAGTTTGGGCAGTTTGAATATGATCACAGGGAAGAATAATGAACTTAGTAAAAACCCAGGGACGTCTGCTAATGGAATTCATTCAAAAAGTGGTGAGAGTGCAAGCGAAGATACAAGTGAAGGAAGCGGAGCAAATTCTCAGGATGACTCTGAGTTGAAATCAGGGGGCAGGCAGAATTCTTTGGAAGCTGAACCACCTCAAAATGGAAGTTCAGTGCACCCTCCTCAAAATGGGGGAGTTAATACTCATCACGGGGTGGTTAATCAAGTTATGCCTATCTCTGCTGCTGGCGCTCCTGTAGCCGTCCCTGGTCCCACAACAAACCTAAATATTGGAATGGATTATTGGGGAGCACCAACTTCTTCTGCAGTTCCTGTGCTGCATGGAAAGGTTCCTTCTAATGCAGTTGCTGGGGGAATGGTTGCTGCTGGATCACGGGATGGTGTTCAGTCACAACATTGGCTTCAGGATGAACGAGAGCTTAAAAGACAAAGACGGAAGCAGTCTAATAGAGAATCTGCTCGCAGATCCAGGTTGCGCAAGCAGGCTGAGTGCGATGAACTAGCACAACGTGCTGAGGCCTTGAAAGAAGAAAATGATTCTCTCCGGTCGGAAGTGAGTCGAATTAAGAGTGAGTACGAGCAGTTGCTCTCAGAGAATGCTGCACTGAAGGAGAGACTGGGCGAACTTCCTGAGAAAGAAGATTTTAGGTCCGGCCAGAATGATGAAAATGTTAGTAACGAAGCTCAACAGACTGGGCAGGAGGAAGGCTGTGAAGGGTGA 1206 0.476 MVGSKADKTSNDKEPKTPATSQASTTSTGAINPDWSSFQTYSPIPPHGYLASSPQAHPYMWGVQHIMPAYGTPPHPYVAMYPPGGIYAHPSMPPGSYPFSPFAMPTSNGIAEASGNTPGSIEGDGKPPEVKEKLPIKRSKGSLGSLNMITGKNNELSKNPGTSANGIHSKSGESASEDTSEGSGANSQDDSELKSGGRQNSLEAEPPQNGSSVHPPQNGGVNTHHGVVNQVMPISAAGAPVAVPGPTTNLNIGMDYWGAPTSSAVPVLHGKVPSNAVAGGMVAAGSRDGVQSQHWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENDSLRSEVSRIKSEYEQLLSENAALKERLGELPEKEDFRSGQNDENVSNEAQQTGQEEGCEG 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1957 401 Coils Coil 319 367 - -
Prci5g1957 401 Pfam bZIP transcription factor 299 361 IPR004827 GO:0003700|GO:0006355
Prci5g1957 401 SMART brlzneu 299 363 IPR004827 GO:0003700|GO:0006355
Prci5g1957 401 MobiDBLite consensus disorder prediction 1 39 - -
Prci5g1957 401 MobiDBLite consensus disorder prediction 15 39 - -
Prci5g1957 401 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 306 321 IPR004827 GO:0003700|GO:0006355
Prci5g1957 401 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 301 364 IPR004827 GO:0003700|GO:0006355
Prci5g1957 401 PANTHER G-BOX-BINDING FACTOR 3-RELATED 14 393 IPR044827 GO:0003700|GO:0006355|GO:0043565
Prci5g1957 401 MobiDBLite consensus disorder prediction 365 401 - -
Prci5g1957 401 Pfam Disordered region downstream of MFMR 132 266 - -
Prci5g1957 401 CDD bZIP_plant_GBF1 304 354 IPR045314 GO:0003700|GO:0006355
Prci5g1957 401 MobiDBLite consensus disorder prediction 143 225 - -
Prci5g1957 401 MobiDBLite consensus disorder prediction 109 225 - -
Prci5g1957 401 MobiDBLite consensus disorder prediction 287 325 - -
Prci5g1957 401 Gene3D - 302 356 - -
Prci5g1957 401 SUPERFAMILY Leucine zipper domain 302 358 IPR046347 GO:0003700|GO:0006355
Prci5g1957 401 MobiDBLite consensus disorder prediction 293 308 - -
Prci5g1957 401 MobiDBLite consensus disorder prediction 366 382 - -
Prci5g1957 401 Pfam G-box binding protein MFMR 7 93 IPR012900 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1957 Prci-Chr5 37450877 37459041 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1957 1 397 bZIP Transcription Factor Family AT2G35530 60.732 7.03e-163 462
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci5g1957 MFMR_assoc 5.8e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1957 K09060 - gmx:778122 620.928