Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1956 ATGGAGGGAGAAGCAGAGCAAGAAGAAGCTCTCCGTCTCAAAGCCATCGCCGAATCCAAATACAAAAGCTCTAACCTCGGCTCAGCTTTGAAATATGCCAAGCGAGCCCAACGCCTTGTTCCTGACCTCGATGGTATCTCCGAATTGGTTACATCTTTAGACATACTCAGCGTGGCCTCCAAATCGCCCACTCCTGACTGGTACAAGATACTCCAGGTCGAGCCCTTTGCTCACTCCAACGTCATTCGGAAGCAGTACAAGAAGCTGGCTTTGATTCTTCACCCGGACAAGAATCCCCATGCGGCTTCCGAGGAGGCGTTCAAGCTTGTTAGCGAGGCGTTTCGATTTCTTTCTGATAGAATTCGGAGGAAGGAGTACGATATGAAGTTGAGGATTCGGATTCAGGATGAGGCGACAGAGGGTTCGAAGCAGCCGGTGGAGACCTTCTGGACAGCTTGCTGCACTTGTCGGCTTCTGCATCAGTTCGAGAGGAAGTACGTGAACCATAATTTGGTGTGCCCTAGTTGTAAAAAGAGTTTCAAAGCCGTGGAAGTTGAGAATGGAAACGAGTCTGAGGAGGAGGACGGGGGGGTGAGGGTTCGGAATAGAAGTATTAGGTTGAGAGTTCCGAGCTTGAGGAGGAAATTTGGTACTATTGGCAAATCACGAACCGTGAAGAGGAAAGTGGGCGGAGAAGAGGCTGAACCTGTGACCAGCAAGAGTGGTAGATTAAAGGATAAAGTTGGAGGCGTTGAAGTGAGAAATGGGGAATTAGAGAGTGAAGGAGCTGTTGGCAAATGGAGTAGGGGAAGACTGAGAAGTAGAGGCTTGAAGAGGAGAATGAGCACTGTTGGGGATGTGTTGGAAAGGTCTAAACCAAAGAAAATCAGAACTCGCGAGGAAACGATGACATTAGCAGAAATGCAGTCTGAAATCAAGAAAAAGGCTCAGCAGAAGAGGCAGATGATATTGAAGCCAAAGGAAAAGGAGGGGGATAAAACACAGAAGAGGAACGAGCAGGAGGAATTACAAAAGGCTTTAAAAAGTTCCAGGGGTTCGTTGACTGTCAAACTGAAAAGTTTGAAGATCAGGAACCTACTAGTTGAGGAGAAGCAAGCATCTCTTGCTAAGAGTAAAGAATTGAAAATTGTCGAGCACAGTAACTCTAGCAGTGGTGATATGGAAAATATGGCAGTAGTGGATTCAGATTTTTATGATTTTGATAAAGATAGAGTAGAGAGAAGCTTTAAGAAAGGTCAGGTGTGGGCTGTTTATGACGATGATGATGGAATGCCAAGGAATTATGCTCTGATTGATGAAGTCGTTTCCGTAATTCCTTTTGAAGTAAGAATAAGTTGGCTGGATCTACAAAGCAGCGGGGATGGAAAGATGATTAGTTGGGAGGAAAGGGGATTTCGTATATCTTGTGGGAGATTTAAAGTTGCGAGGAAGACTTCCATAAATTCTGTAAATATCTTTTCCCATGTTGTAGATTGCGAACGGGCAGCTCGTGAAGTTTACAGAATTTATCCAAAAAAGGGGTCTGTGTGGGCACTTTATAATAAGGCAGCTTCTGATGTAGAGGAAAGAAGCCTTGCAGTTCAGAGCAAGAGTTTCTATGATATCGTTGTATTCTTGACGAGTTATAATGAGATAACTGGATTAAGCATGGCATATCTTGAGAAAGTTAAAGGTTACAAGGCAATATTCAAGAGACAAGAAATGGGGTGTCATGCTGTTAGATTTCTTGAAAGAGATTGTTTCCTGTCAATTTCGCATCAAATTCCTGCACGGAAACTTTCTGGCATTGAAACTCCTGAATTTTTGAGAGACTCATGGGAACTTGATCCCGCTTCACTTCCTTCAGATTTACTGGCTTAA 1881 0.4423 MEGEAEQEEALRLKAIAESKYKSSNLGSALKYAKRAQRLVPDLDGISELVTSLDILSVASKSPTPDWYKILQVEPFAHSNVIRKQYKKLALILHPDKNPHAASEEAFKLVSEAFRFLSDRIRRKEYDMKLRIRIQDEATEGSKQPVETFWTACCTCRLLHQFERKYVNHNLVCPSCKKSFKAVEVENGNESEEEDGGVRVRNRSIRLRVPSLRRKFGTIGKSRTVKRKVGGEEAEPVTSKSGRLKDKVGGVEVRNGELESEGAVGKWSRGRLRSRGLKRRMSTVGDVLERSKPKKIRTREETMTLAEMQSEIKKKAQQKRQMILKPKEKEGDKTQKRNEQEELQKALKSSRGSLTVKLKSLKIRNLLVEEKQASLAKSKELKIVEHSNSSSGDMENMAVVDSDFYDFDKDRVERSFKKGQVWAVYDDDDGMPRNYALIDEVVSVIPFEVRISWLDLQSSGDGKMISWEERGFRISCGRFKVARKTSINSVNIFSHVVDCERAAREVYRIYPKKGSVWALYNKAASDVEERSLAVQSKSFYDIVVFLTSYNEITGLSMAYLEKVKGYKAIFKRQEMGCHAVRFLERDCFLSISHQIPARKLSGIETPEFLRDSWELDPASLPSDLLA 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1956 626 MobiDBLite consensus disorder prediction 308 346 - -
Prci5g1956 626 Pfam DnaJ domain 66 127 IPR001623 -
Prci5g1956 626 Pfam Domain of unknown function (DUF3444) 395 602 IPR024593 -
Prci5g1956 626 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Prci5g1956 626 PANTHER BNAC03G44070D PROTEIN 6 621 - -
Prci5g1956 626 SUPERFAMILY Chaperone J-domain 61 131 IPR036869 -
Prci5g1956 626 MobiDBLite consensus disorder prediction 308 348 - -
Prci5g1956 626 Gene3D DnaJ domain 55 154 IPR036869 -
Prci5g1956 626 Coils Coil 305 325 - -
Prci5g1956 626 SMART dnaj_3 65 122 IPR001623 -
Prci5g1956 626 CDD DnaJ 66 119 IPR001623 -
Prci5g1956 626 PRINTS DnaJ domain signature 86 101 IPR001623 -
Prci5g1956 626 PRINTS DnaJ domain signature 102 122 IPR001623 -
Prci5g1956 626 PRINTS DnaJ domain signature 68 86 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1956 Prci-Chr5 37447622 37449826 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1956 2 185 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 31.683 3.67e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1956 - - qsa:O6P43_033368 754.977