Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1953 ATGTCGCATTCCTCGTCTCTGTTGAATCCTCAAGCTCACCAAATCCTCTATCCTTTTCCCATTTTCTCTTCTTCTGCTTCTCCACGCAATCTTTGGCCTTTGCGAACTGTGAAGTTTCCGAGGAAGCTTCCTTCTCCGCTACTAGCTTTTCAGTCCTCTAATGAAGTACATGTTGACGACTTGGAAGAACATGTTATCGGCGACTGTGTCGTCTTCGAAGACGGCATATTCGAAGACCCAGTTCTTCAGGGAGACCTGGACATTGATAATTCCGGCTCAGATAATTCGAAACCCAAATCGAAGAAAAATGTCCCGGAGATTGTGCCGGAGAATTTGGTCCCCGACCGGTGGAGAGAAGCTCAGGCGGAGATCAACATCACGAAGAAGGAGAGGCGCAAGATTGCTCAGGAGATTGAATTCAATAGCAAAGTCGAGAAGAAGAAACAAGGGATGGTTCCCCTGAGGCATATGAACCTGGAAGAATATAAGGCGTATAAAGAGGCCAAATTGGCTCACCTGAAGCCCTTGGTTCTCGACAACCCTTCGAGTTTTCCGGTGAGAGAGGAGGTTCCCATCGGAAAAGAAGTTAATGTGAGTAATATGCATACTAGCGAACGCGTGGAGCCTAAGAATCCTAGGTGGGCAGTTTACGGCAGGGGTCTGGAGGACGTTTCAGACTTTTTCAGTAGTGAGAAGTACAATCCTAGTGAAAAGAATACCGAAGGTCAAGACCGTCGTAGGTTGTTTACAAAGGAGGAGAAGGTTTTATTGAATAAGCGGATACCAGATTTGGCAGCTGCTACTTCTGAAAAGTGGCTGCCTCTGCACACTCTTGCTGCATGTGGAGAATTTTACCTTGTAGATTCTTTGTTGAAACATAATGTTGATATCAATGCTGTTGATAAGGATGGTTTGACTGCTCTTCACAAGGCCATAATTGGTAAAAAGCAGGCCATAACCAACTACCTTTTGAGAAATTCAGCTAATCCATTTGCACTTGATAAAGATGGGGCAACCTTGATGCACTATGCTGTTCAGACAGCTTCCAGCCAGACGATTAAAATCCTCTTACTATATAATGTTGATATAAATCTTCAGGACAATGATGGGTGGACACCATTACATGTTGCTGTTCAAGCCCGAAGAACGGATGTTGTGAGGCTTCTACTTATTAAAGGTGCTGACAAGACTATAAAAAACAAGGATGGTTTAACTCCACTTGACCTTTGTCTTCATTCTGGCCAAGACTTGAGAACATACGAGCTAATCAAGCTGTTGAAGCAGCTTCCAAGGCGTTAG 1299 0.4442 MSHSSSLLNPQAHQILYPFPIFSSSASPRNLWPLRTVKFPRKLPSPLLAFQSSNEVHVDDLEEHVIGDCVVFEDGIFEDPVLQGDLDIDNSGSDNSKPKSKKNVPEIVPENLVPDRWREAQAEINITKKERRKIAQEIEFNSKVEKKKQGMVPLRHMNLEEYKAYKEAKLAHLKPLVLDNPSSFPVREEVPIGKEVNVSNMHTSERVEPKNPRWAVYGRGLEDVSDFFSSEKYNPSEKNTEGQDRRRLFTKEEKVLLNKRIPDLAAATSEKWLPLHTLAACGEFYLVDSLLKHNVDINAVDKDGLTALHKAIIGKKQAITNYLLRNSANPFALDKDGATLMHYAVQTASSQTIKILLLYNVDINLQDNDGWTPLHVAVQARRTDVVRLLLIKGADKTIKNKDGLTPLDLCLHSGQDLRTYELIKLLKQLPRR 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1953 432 Gene3D - 342 429 IPR036770 -
Prci5g1953 432 ProSiteProfiles Ankyrin repeat region circular profile. 336 368 - -
Prci5g1953 432 ProSiteProfiles Ankyrin repeat profile. 336 368 IPR002110 GO:0005515
Prci5g1953 432 ProSiteProfiles Ankyrin repeat region circular profile. 369 401 - -
Prci5g1953 432 ProSiteProfiles Ankyrin repeat profile. 369 401 IPR002110 GO:0005515
Prci5g1953 432 FunFam Ankyrin repeat domain-containing protein, chloroplastic 243 340 - -
Prci5g1953 432 SMART ANK_2a 369 398 IPR002110 GO:0005515
Prci5g1953 432 SMART ANK_2a 402 431 IPR002110 GO:0005515
Prci5g1953 432 SMART ANK_2a 270 299 IPR002110 GO:0005515
Prci5g1953 432 SMART ANK_2a 303 332 IPR002110 GO:0005515
Prci5g1953 432 SMART ANK_2a 336 365 IPR002110 GO:0005515
Prci5g1953 432 ProSiteProfiles Ankyrin repeat profile. 303 335 IPR002110 GO:0005515
Prci5g1953 432 SUPERFAMILY Ankyrin repeat 262 415 IPR036770 -
Prci5g1953 432 MobiDBLite consensus disorder prediction 83 104 - -
Prci5g1953 432 Gene3D - 236 341 IPR036770 -
Prci5g1953 432 ProSiteProfiles Ankyrin repeat profile. 270 302 IPR002110 GO:0005515
Prci5g1953 432 FunFam Ankyrin repeat domain-containing protein, chloroplastic 341 432 - -
Prci5g1953 432 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 168 427 - -
Prci5g1953 432 Pfam Ankyrin repeats (3 copies) 322 400 IPR002110 GO:0005515
Prci5g1953 432 Pfam Ankyrin repeats (many copies) 274 316 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1953 323 420 Ion Channels AT2G25600 30.693 4.02e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1953 - - hbr:110642227 560.451