Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1934 ATGGAGTTGTTTCCAGCACAGCCTGATTTGTCTTTGCAGATTAGTCCTCCCAACACCAAATCCACATCAGGATGGAGAAATAGTGGGACGCAAGATCAAGTTGATTTGGGGTTCTGGAAGAGAGCTCTGGAGACCAGAAGCTCATTGCTTTCCTCAATGCCTAAAACTGCCACTGCTGCTGACCTTTTTGACCTTTCACTTTCCAATAATTCCAACCCGGCCGCTACATTCACGCCTTCAGTTTCTTCCTCAGATGTCACTCACAACCACCGCTTCCAAAACGATCCGTTTCATCAGCACCACCACCACCCTCAGTACTTGACGCAGGAACTGGGATTTCTCAGACCCATCAGAGGAATCCCTGTGTACCAGAACCCTCATCATCCTCATCCTCATCCTCCTGCTCTTCCTTTCTCTCAAGTTCATCAGAATCCGGATGTTTCTATTTCAGCAGCAGTGAAAAACTCCACCGCCTGCACAAGCTCCGCCCCTTTTCCTTTTCATCATCATCATAGTCAAGGTTTGATGAGGTCGAGGTTTTTGTCTCATCGCTTCCCGACCAAGCGCAGCATGAGAGCTCCTAGGATGCGTTGGACTACCACCCTTCATGCTCGCTTTGTTCATGCCGTTGAGCTTTTGGGTGGCCACGAAAGGGCTACACCCAAATCCGTTCTCGAGCTAATGGATGTCAAGGATCTTACTTTAGCCCACGTTAAATCTCATTTACAGATGTATCGGACGGTGAAAACCACAGATAGAGCAGCAGCTTCTTCCACAGGTCAATCAGACGGATATGATAATGGATCATCTGGGGATACTTCTGAAGAATTAATGTTCGACATGAACAATTTGGGAAGATCCGATCTATCTACCATGCAGGGAAGACAATGTGTTCATCAAGAAAAGGAATATCACGGCCTCTGGAGCAACTCTTCCAGAGAAGCTTGGCTGCATGGGAAGCCAAAGGAGATTGATTCTGTTGGAAACAACAATGTTAGTTCTCTTGAGAAGGAGAGAACATCAGATGGAAGCTCATCGTCAAACATTTCAGGATCAAGCCCTAAGAAGCCTAATTTGGATTTGGAGTTCACCTTGGGACAGCCAATATGA 1110 0.4676 MELFPAQPDLSLQISPPNTKSTSGWRNSGTQDQVDLGFWKRALETRSSLLSSMPKTATAADLFDLSLSNNSNPAATFTPSVSSSDVTHNHRFQNDPFHQHHHHPQYLTQELGFLRPIRGIPVYQNPHHPHPHPPALPFSQVHQNPDVSISAAVKNSTACTSSAPFPFHHHHSQGLMRSRFLSHRFPTKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSTGQSDGYDNGSSGDTSEELMFDMNNLGRSDLSTMQGRQCVHQEKEYHGLWSNSSREAWLHGKPKEIDSVGNNNVSSLEKERTSDGSSSSNISGSSPKKPNLDLEFTLGQPI 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1934 369 NCBIfam myb-like DNA-binding domain, SHAQKYF class 194 247 IPR006447 GO:0003677
Prci5g1934 369 MobiDBLite consensus disorder prediction 1 29 - -
Prci5g1934 369 Gene3D - 193 250 - -
Prci5g1934 369 FunFam Myb family transcription factor 192 250 - -
Prci5g1934 369 MobiDBLite consensus disorder prediction 251 276 - -
Prci5g1934 369 MobiDBLite consensus disorder prediction 76 105 - -
Prci5g1934 369 SUPERFAMILY Homeodomain-like 191 247 IPR009057 -
Prci5g1934 369 MobiDBLite consensus disorder prediction 321 369 - -
Prci5g1934 369 MobiDBLite consensus disorder prediction 91 105 - -
Prci5g1934 369 Pfam Myb-like DNA-binding domain 195 246 IPR001005 -
Prci5g1934 369 MobiDBLite consensus disorder prediction 326 357 - -
Prci5g1934 369 MobiDBLite consensus disorder prediction 11 29 - -
Prci5g1934 369 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 8 368 IPR044847 GO:0000976|GO:0006355|GO:0010158
Prci5g1934 369 MobiDBLite consensus disorder prediction 76 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1934 Prci-Chr5 37325673 37330282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1934 63 368 G2-like Transcription Factor Family AT5G16560 39.665 1.10e-53 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Prci5g1934 Myb_DNA-binding 1.7e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1934 - - aprc:113868756 439.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci5g1934 5 37325673 37330282 Prci5g1934 5 37325673 37330282 ECH