Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1931 ATGGTGGAAGGAAGAGTTTGTTTGCCCAAGGAAGCTGGAAATGTATTAGAATCTTTGAAGTGTAAAAGGCTTCACCAAGCAAAATCTTCAACTGCCACCGAGATAACTGTTGATAATATGATGACAAGAAGCGGAGGGGATGCTTTGAGGGCTTCGTCATCGTGCGGTATGAGATTGCATGGTAATGCAGATGCCTTTTCCAAGCGGAAAGTGGATAAGTTTGACATGAGTGATCTAGAATGGACAGAAAAAATTCCCGAGTGTCCTGTGTACTCCCCAACAAAGGAGGAATTTGAGGACCCTTTGGTTTATTTGCAAAAGATAATTCCTGTGGCTTCGAGATATGGTATATGCAAGATTATTTCCCCTTTAAGTGCTTCAGTTCCTGCTGGAGTTGTGTTGATGAAGGAGAAAGCAGGATTTAAGTTTGCAACTAGAGTACAGCCACTTCGCCTTGCTGAGTGGGATACTGAAGACAAAGTTACATTTTTCATGAGTGGAAGAAATTATACATTTCGCGATTTTGAAAAAATGGCAAACAAGGCTTTTGCACGTAGATATTGCAGTGCTGGATGTCTTCCTGCCACATTTTTGGAAAAAGAGTTTTGGCATGAAATTAGGTGTGGAAAGATGGAAACTGTCGAATATGCATGTGATGTTGATGGTAGTGCTTTTTCCTCTTCTCCTAATGATCAACTTGGGAGCAGCAAATGGAATTTGAAGAAGCTTTCTCGGCTGCCCAAGTCCATTTTGCGGCTCTTGGAAACAGTAATTCCGGGAGTAACAGAACCTATGCTATACATTGGAATGCTGTTTAGTATGTTTGCTTGGCATGTTGAGGATCACTTTTTGTACAGTATTAATTATCATCACTGTGGGGCATCAAAAACTTGGTACGGCATTCCAGGTCACGCAGCTTTGGAATTTGAAAGGGTCGTCAGAGAACATGTGTATACTAATGATATTCTGTCAAGTGAAGGGGAAGATGGAGCCTTTGATGTTCTGCTGGGGAAAACAACTCTGTTTCCTCCAAATATTTTGTTGGAACATGAAGTGCCGGTCTACAAAGCTGTTCAAAGACCGGGAGAGTTTATTGTTACCTTTCCTGGAGCATATCATTCTGGTTTTAGTCATGGTTTTAACTGTGGAGAAGCAGTGAATTTTGCCATTGGTGATTGGTTTCCTCTAGGGGCAATGGCCAGTAGGCGATATGCTCATCTAAACAGGGTTCCTTTGCTACCTCACGAAGAACTTTTAAGCAAAGAAGCAATGCTTCTCTATACAAGTTTAGAACTTGAAGATTCAGACTTTCCTTCTGCAGACTTGATGTTCCATAATAGCATCAAGATATCTTTTGTTAATTTGATGCGCTTCCAGCATTGTGCTCGCTGGTTCTTAATTAAATCAAGGGTGTGCACAAATGTTTCTTCACACTCGCATGGCTCAATTCTCTGTAGTCTCTGCAAGCGTGACTGTTATGTAGCATATGTTGACTGTGACTGTCACATGCATCCAGTGTGTCTACGCCATGATGTCGAATCTCTTGATTTCTGCTGTGGGAGAAAACCCATACTTTACTTGAGGGAGGATATTGAGGATATGGAAGCTGCTGCCAAGAGGTTTGAGCAGGAAGATGGAATATTGGATGCGATAATGAAGCAGATCAAGGCTGACAATAACATGTATTCATATCCCTTGAAAAATATGTTTCAGAGAGCTGAAGCCGATGGATATACCCCTTATTGTGAGATAAAATTTGATCCTGGTACTGAATCTTACTCAGGCTCAGATCAGTTAATAAATATTCAAGAGCGTGCTATTCAAAATCAATGGCCTTTGAGGCATCGCTCAGGATCAGAATATCACAAACCCGAAGTGTCTGATGTTTCCTTCGTTTCTGCTGCATCTGCTCTTTTCTCTCTTTCTGATCCTCTTGAGTGTTCTGCCACTACAGAAAATGATGATAGGCGTGCAAACTTGGGCCTTGTTAATTTTGAAGAGGTATGTGAAAGAGTGTCCCCTAGTGTATGTGGATCCTCAGTATCCCCTACACGGAATCACGACAGCTCGAGTGAACCTCATGGTGATCTTTATAGATTAGAGATGACATCCACCGTGACCAATGACAGCGATGATTCTGATTCAGAGATATTTAGGGTAAAGCGGCCTTCTTCTTTAAAGGCGGAGAGGAGAAATGGGAATGATGGGACGTGTCCTAGGCATTTTGACCACCAGGGACTAAAACGATTGAAGAAGAACTGTGATGAAGGAAGAAGTGGGGAACTAATAGACTACGGCAAAGGCAGTGAATCAGGTTACAGCAAGTTGAGGCACCCAGCATATCACAAAATTGACGGCGAAACCTGTACCAGGGAAAGATATCCAAAGGTTTATAGTAATCCCATTTCCATAAGGTACAAGAAACTAGGAAACGAGGACTTGAGTGGAGGAGATCACCACAAGAGAAACTGGTTGCAGCAGAGTATGATGGAACCATCGTCTCCCAAAGAGATTGGGATTGGACCAAAGCGGCTTAAAGTGCGAGGCCCCTTCATTCCTGGGCTTACAGAGCCAGATTGA 2580 0.4248 MVEGRVCLPKEAGNVLESLKCKRLHQAKSSTATEITVDNMMTRSGGDALRASSSCGMRLHGNADAFSKRKVDKFDMSDLEWTEKIPECPVYSPTKEEFEDPLVYLQKIIPVASRYGICKIISPLSASVPAGVVLMKEKAGFKFATRVQPLRLAEWDTEDKVTFFMSGRNYTFRDFEKMANKAFARRYCSAGCLPATFLEKEFWHEIRCGKMETVEYACDVDGSAFSSSPNDQLGSSKWNLKKLSRLPKSILRLLETVIPGVTEPMLYIGMLFSMFAWHVEDHFLYSINYHHCGASKTWYGIPGHAALEFERVVREHVYTNDILSSEGEDGAFDVLLGKTTLFPPNILLEHEVPVYKAVQRPGEFIVTFPGAYHSGFSHGFNCGEAVNFAIGDWFPLGAMASRRYAHLNRVPLLPHEELLSKEAMLLYTSLELEDSDFPSADLMFHNSIKISFVNLMRFQHCARWFLIKSRVCTNVSSHSHGSILCSLCKRDCYVAYVDCDCHMHPVCLRHDVESLDFCCGRKPILYLREDIEDMEAAAKRFEQEDGILDAIMKQIKADNNMYSYPLKNMFQRAEADGYTPYCEIKFDPGTESYSGSDQLINIQERAIQNQWPLRHRSGSEYHKPEVSDVSFVSAASALFSLSDPLECSATTENDDRRANLGLVNFEEVCERVSPSVCGSSVSPTRNHDSSSEPHGDLYRLEMTSTVTNDSDDSDSEIFRVKRPSSLKAERRNGNDGTCPRHFDHQGLKRLKKNCDEGRSGELIDYGKGSESGYSKLRHPAYHKIDGETCTRERYPKVYSNPISIRYKKLGNEDLSGGDHHKRNWLQQSMMEPSSPKEIGIGPKRLKVRGPFIPGLTEPD 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1931 859 MobiDBLite consensus disorder prediction 827 859 - -
Prci5g1931 859 Pfam C5HC2 zinc finger 485 536 IPR004198 -
Prci5g1931 859 Coils Coil 524 544 - -
Prci5g1931 859 ProSiteProfiles JmjC domain profile. 235 405 IPR003347 -
Prci5g1931 859 Gene3D Cupin 81 410 - -
Prci5g1931 859 Pfam jmjN domain 89 121 IPR003349 -
Prci5g1931 859 SUPERFAMILY Clavaminate synthase-like 166 419 - -
Prci5g1931 859 FunFam Lysine-specific demethylase isoform A 83 432 - -
Prci5g1931 859 MobiDBLite consensus disorder prediction 676 695 - -
Prci5g1931 859 PANTHER LYSINE-SPECIFIC DEMETHYLASE 80 652 - -
Prci5g1931 859 SMART JmjN_1 87 128 IPR003349 -
Prci5g1931 859 ProSiteProfiles JmjN domain profile. 88 129 IPR003349 -
Prci5g1931 859 SMART cupin_9 235 405 IPR003347 -
Prci5g1931 859 Pfam JmjC domain, hydroxylase 265 388 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1931 Prci-Chr5 37295059 37301367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1931 85 555 JUMONJI Transcription Factor Family AT2G34880 32.597 7.70e-65 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Prci5g1931 JmjC 6.6e-39 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1931 - - gmx:100798611 1246.11