Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1919 ATGACATTGGTAAGAGAGAGGAGGCACCAGGAAGCTCTAAGGCTTTCCTTACCATCACATCCCATCCCAGAAACTGATTACTGTCATCAAATCCAAATCCCAGCCTCCAATGGGAACTCTCTGGCCATCAAGAACCTTTTGAGCCTCGAGAAACTCACAGTTCTCGGCCATGGCAATGGTGGTACAGTGTATAAAGTCCATCACAAGAAGAACCAAACCTTCTATGCTTTGAAAGTCCTCAGGTGCAACCAGAATGCTCTTGAAATCTTGGCAAGAGTGGATTCCCCATATATTGTGAGGTGTCATGCAGTTTTTGACAATAATTGCAGTGAATCTCATGTAAATGGAGGTGGCGGCATTAGCTTTGTCATGGAATACATGGAAAGAGGGTCATTACATGATGTGTTGAGAGAACACGAAGCACTACCAGAGGAAGTGATCTCTGTCTTGGCAAAGAGGGTTTTGGAAGGACTCAACTATTTGCACGGCATGAACATAGTGCACAGAGATATCAAACCTTCAAATTTGCTTGTGAATGACAAAGGGGAGGTGAAGATTGCAGATTTTGGAGTGAGTCATGTGGTAGAAGGAAGGTTTGAAGCATCAGATTGTAATGCAGGCACATGTGCTTACATGAGCCCAGAAAGAGTTGATCCTGAGAGATGGGGTGGTGAAAATGCAGATGGTTTTGCTGGTGATGTGTGGTCAGTGGGAGTGCTGATGCTAGAATGTCTTCAGGGTCACTTCCCTTTTACTGATGCAGGTCAAAAACCAGACTGGGTCACGTTGATGTGTGTGATTTGCTCTGGTGAGAAGCTTGAAATGCCAGAGAAGGCATCAGCTGAGTTCAAAAGCTTCGTGCAGAGATGTTTAGAGAAGGATTGGAGGAAAAGAGCAACAGTACGTGAGCTTCTTGATCACCCTTTTGTGAACACCAAGTTCTGCCCTTCTGGCAAAGGACTGCTCAATTATCTTCTGCATCGTTGA 987 0.4498 MTLVRERRHQEALRLSLPSHPIPETDYCHQIQIPASNGNSLAIKNLLSLEKLTVLGHGNGGTVYKVHHKKNQTFYALKVLRCNQNALEILARVDSPYIVRCHAVFDNNCSESHVNGGGGISFVMEYMERGSLHDVLREHEALPEEVISVLAKRVLEGLNYLHGMNIVHRDIKPSNLLVNDKGEVKIADFGVSHVVEGRFEASDCNAGTCAYMSPERVDPERWGGENADGFAGDVWSVGVLMLECLQGHFPFTDAGQKPDWVTLMCVICSGEKLEMPEKASAEFKSFVQRCLEKDWRKRATVRELLDHPFVNTKFCPSGKGLLNYLLHR 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1919 328 SMART serkin_6 49 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g1919 328 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Prci5g1919 328 PRINTS Tyrosine kinase catalytic domain signature 232 254 IPR001245 GO:0004672|GO:0006468
Prci5g1919 328 PRINTS Tyrosine kinase catalytic domain signature 160 178 IPR001245 GO:0004672|GO:0006468
Prci5g1919 328 PRINTS Tyrosine kinase catalytic domain signature 124 137 IPR001245 GO:0004672|GO:0006468
Prci5g1919 328 Gene3D Transferase(Phosphotransferase) domain 1 44 319 - -
Prci5g1919 328 ProSitePatterns Protein kinases ATP-binding region signature. 55 78 IPR017441 GO:0005524
Prci5g1919 328 Pfam Protein kinase domain 50 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g1919 328 SUPERFAMILY Protein kinase-like (PK-like) 50 312 IPR011009 -
Prci5g1919 328 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 39 312 - -
Prci5g1919 328 ProSiteProfiles Protein kinase domain profile. 49 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g1919 328 CDD PKc_MAPKK_plant_like 48 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1919 Prci-Chr5 37220501 37221867 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1919 1 313 MAP Kinase Kinase Gene Family AT1G32320 53.459 9.67e-111 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Prci5g1919 Pkinase 6e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1919 K20604 - gmx:100817973 463.766